Additional file 3 of Comparing Xenium 5K and Visium HD data from identical tissue slide at a pathological perspective

Supplementary Material 3: Supplementary Fig. 3. Differential-expression analysis between grade 2 and grade 3 LUAD tumors. (a) Hallmark pathway enrichment for genes up-regulated in grade 2 tumors detected in Visium. (b) Hallmark pathway enrichment for genes up-regulated in grade 3 tumors in Visium. (c) Dot-plot showing expression of selected DEGs, together with the epithelial markers NKX2-1 and EPCAM, across Banksy-defined cell clusters.

Institutions

Publication Details

Journal
Figshare
Published
2025-01-01
DOI
https://doi.org/10.6084/m9.figshare.29650556.v1
Primary Topic
Genetic Mapping and Diversity in Plants and Animals
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Additional file 3 of Comparing Xenium 5K and Visium HD data from identical tissue slide at a pathological perspective

Figshare
Genetic Mapping and Diversity in Plants and Animals
article

Additional file 3 of Comparing Xenium 5K and Visium HD data from identical tissue slide at a pathological perspective

article en

Abstract

Supplementary Material 3: Supplementary Fig. 3. Differential-expression analysis between grade 2 and grade 3 LUAD tumors. (a) Hallmark pathway enrichment for genes up-regulated in grade 2 tumors detected in Visium. (b) Hallmark pathway enrichment for genes up-regulated in grade 3 tumors in Visium. (c) Dot-plot showing expression of selected DEGs, together with the epithelial markers NKX2-1 and EPCAM, across Banksy-defined cell clusters.

Figshare
Stockholm University (SE)
Openalex Percentile: Top 47%
Genetic Mapping and Diversity in Plants and Animals
DOISourceOpenAlex
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Additional file 3 of Comparing Xenium 5K and Visium HD data from identical tissue slide at a pathological perspective · Figshare (2025) | TGRS Research Map | TGRS