Additional file 7 of Adaptive evolution of stress response genes in parasites aligns with host niche diversity

Additional file 7. Extended version of Fig. 4. Detected putative stress gene orthologs (protein sequences) including species coverage (cyan = Cichlidogyrus, red = Kapentagyrus) (a), gene ontology (GO) terms (black = term applies) (b), presence in transcriptome annotation (blue = present) (c), and hypothesis testing of different models for detecting positively selected gene sites (I, IIa, IIb) (d) with * indicating P < 0.05 for test results and the colour scale indicating the likelihood ratio test statistics (LRT) (see the ‘Methods’ section). Rows and columns of the GO heatmap are automatically sorted through Euclidean distances as implemented in ComplexHeatmap.

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Publication Details

Journal
Figshare
Published
2025-01-01
DOI
https://doi.org/10.6084/m9.figshare.28192124.v1
Primary Topic
Parasite Biology and Host Interactions
Type
article
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Additional file 7 of Adaptive evolution of stress response genes in parasites aligns with host niche diversity

Figshare
Parasite Biology and Host Interactions
article

Additional file 7 of Adaptive evolution of stress response genes in parasites aligns with host niche diversity

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Abstract

Additional file 7. Extended version of Fig. 4. Detected putative stress gene orthologs (protein sequences) including species coverage (cyan = Cichlidogyrus, red = Kapentagyrus) (a), gene ontology (GO) terms (black = term applies) (b), presence in transcriptome annotation (blue = present) (c), and hypothesis testing of different models for detecting positively selected gene sites (I, IIa, IIb) (d) with * indicating P < 0.05 for test results and the colour scale indicating the likelihood ratio test statistics (LRT) (see the ‘Methods’ section). Rows and columns of the GO heatmap are automatically sorted through Euclidean distances as implemented in ComplexHeatmap.

Figshare
Royal Museum for Central Africa (BE), Université Libre de Bruxelles (BE), University of Lubumbashi (CD), University of Antwerp (BE), University of Botswana (BW), University of Graz (AT), University of Douala (CM), University of Oslo (NO), Institute of Natural Sciences (BE), University of Ngaoundéré (CM), Hasselt University (BE)
Life in Land
Openalex Percentile: Top 50%
Parasite Biology and Host Interactions
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Additional file 7 of Adaptive evolution of stress response genes in parasites aligns with host niche diversity · Figshare (2025) | TGRS Research Map | TGRS