Additional file 9 of The origin and evolution of cultivated rice and genomic signatures of heterosis for yield traits in super-hybrid rice

Additional file 9: Fig. S8. Summary of the hybridization signal (γ) from HyDe analysis among the five super-hybrid rice varieties and their parental progenitors. Heatmap displays the hybridization signals detected by HyDe among five sets of super-hybrid rice and their parental progenitors, as well as the Nipponbare, with O. rufipogon as an outgroup. Each colored square on the heatmap corresponds to a hybridization signal identified by HyDe, with the intensity of color representing the genetic probability of the associated taxa on the Y-axis.