Plots

Quality Control: Boxplots of normalized counts, sample correlation heatmaps, and PCA plots help identify outliers and assess sample relationships.Differential Expression: MA plots and volcano plots visualize the distribution and significance of differentially expressed genes.Gene Expression Patterns: Heatmaps of top differentially expressed genes reveal expression patterns across samples and conditions.Pathway Analysis: Bar plots of enriched GO terms and KEGG pathways highlight biological processes and pathways affected by differentially expressed genes.