Rapid Identification of Antibiotic Resistance in Staphylococcus Using FTIR and Machine Learning

Antimicrobial resistance (AMR) poses a significant threat to global health, with Methicillin-resistant <em>Staphylococcus aureus (MRSA)</em> contributing substantially to morbidity. Rapid identification of MRSA versus Methicillin-susceptible <em>S. aureus (MRSA)</em> is critical for timely and appropriate antibiotic use. This study explores the use of Principal Component Analysis (PCA) and Linear Discriminant Analysis (LDA) on Fourier Transform Infrared (FTIR) spectroscopy data to quickly distinguish MRSA from MSSA. By analyzing the growth patterns and spectral data of SA6538 (MSSA) and SA43300 (MRSA) <em>under antibiotic stress</em>, we demonstrate the feasibility of separation, highlighting spectral differences and their likely biological causes. LDA, when applied to primary, secondary, and tertiary FTIR datasets, achieves high classification accuracy, particularly when initially processed with PCA. This combined approach suggests a rapid and reliable diagnostic method to improve clinical outcomes and curb the spread of AMR.

Publication Details

Journal
Digital Archive @ GSU
Published
2024-08-14
DOI
https://doi.org/10.57709/37395645
Primary Topic
Spectroscopy Techniques in Biomedical and Chemical Research
Type
article
Field-Weighted Citation Impact
0.00
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article

Rapid Identification of Antibiotic Resistance in Staphylococcus Using FTIR and Machine Learning

Digital Archive @ GSU
Spectroscopy Techniques in Biomedical and Chemical Research
article

Rapid Identification of Antibiotic Resistance in Staphylococcus Using FTIR and Machine Learning

article en

Abstract

Antimicrobial resistance (AMR) poses a significant threat to global health, with Methicillin-resistant <em>Staphylococcus aureus (MRSA)</em> contributing substantially to morbidity. Rapid identification of MRSA versus Methicillin-susceptible <em>S. aureus (MRSA)</em> is critical for timely and appropriate antibiotic use. This study explores the use of Principal Component Analysis (PCA) and Linear Discriminant Analysis (LDA) on Fourier Transform Infrared (FTIR) spectroscopy data to quickly distinguish MRSA from MSSA. By analyzing the growth patterns and spectral data of SA6538 (MSSA) and SA43300 (MRSA) <em>under antibiotic stress</em>, we demonstrate the feasibility of separation, highlighting spectral differences and their likely biological causes. LDA, when applied to primary, secondary, and tertiary FTIR datasets, achieves high classification accuracy, particularly when initially processed with PCA. This combined approach suggests a rapid and reliable diagnostic method to improve clinical outcomes and curb the spread of AMR.

Digital Archive @ GSU
Reduced inequalities
Openalex Percentile: Top 53%
Spectroscopy Techniques in Biomedical and Chemical Research
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Rapid Identification of Antibiotic Resistance in Staphylococcus Using FTIR and Machine Learning · Digital Archive @ GSU (2024) | TGRS Research Map | TGRS