Neooccultibambusa coffeae L. Lu & Tibpromma 2025, sp. nov.

Neooccultibambusa coffeae L. Lu & Tibpromma sp. nov. Fig. 16 Etymology. The species epithet “ coffeae ” refers to the host plant genus “ Coffea ” from which the fungus was isolated. Diagnosis. Differs from N. chiangraiensis and N. kaiyangensis X. D. Yu, S. N. Zhang & Jian K. Liu by the greyish-green ascospores. Holotype. HKAS 137604. Description. Saprobic on decaying branch of C. arabica. Teleomorph: Ascomata 140–180 × 200–250 µm (x- = 156 × 218 µm, n = 10), superficial to semi-immersed, solitary to gregarious, small, black spots on host surface, unilocular, globose or subglobose, some with ostiolate. Peridium 10–20 µm wide (x- = 15 µm, n = 20), outer walls comprising 2–4 layers of textura angularis cells, brown to dark brown, inner walls thin, hyaline and density. Hamathecium 2–4 µm wide (x- = 3.2 µm, n = 20), hyphae-like, hyaline, filiform, branched, pseudoparaphyses numerous. Asci 100–200 × 20–30 µm (x- = 156 × 24 µm, n = 20), 8 - spored, bitunicate, cylindrical-clavate, straight, with a short furcate, apically rounded, with an ocular chamber. Ascospores 30–40 × 8–12 µm (x- = 36.6 × 10.3 µm, n = 50), overlapping biseriate, hyaline when young, greyish-green when mature, fusoid or elliptical, 1–3 - septate, guttulate, smooth-walled, mucilaginous sheath present. Anamorph: Not observed. Culture characteristics. Ascospores germinating on PDA within 24 h, colonies reached 4 cm in diameter after two months at 25 ° C, mycelia superficial, filamentous, with filiform margin, flat, smooth, from above, brown at the centre, dark brown at the edge, from below, dark brown. Materials examined. China, Yunnan Province, Xishuangbanna, Pu’wen Town, on a decaying branch of Coffea arabica (Rubiaceae) (22°31'18"N, 101°2'44"E, 850 m alt.), 15 September 2021, LiLu, JHPW 13 (HKAS 137604, holotype), isotype MHZU 23-0056, ex-type living culture KUNCC 24-18351, ex-isotype living culture ZHKUCC 23-0622; China, Yunnan Province, Pu’er, on a decaying branch of C. arabica, (22°36'2"N, 101°0'59"E, 1015 m alt.), 16 September 2021, LiLu, Pu’er 1-5 (HKAS 137603, paratype), isoparatype MHZU 23-0057, ex-paratype living culture KUNCC 24-18353, ex-isoparatype living culture ZHKUCC 23-0624. Notes. In the concatenated phylogenetic analysis, Neooccultibambusa coffeae forms a distinct lineage within Neooccultibambusa, closely related to N. chiangraiensis and N. kaiyangensis (Fig. 17). Morphologically, the new species resembles N. chiangraiensis and N. kaiyangensis in shape, but differs in the colour of ascospores. The ascospores of N. coffeae are greyish-green when mature, while the ascospores of N. chiangraiensis and N. kaiyangensis are pale brown (Fig. 16; Doilom et al. (2017); Yu et al. (2021)). Based on nucleotide comparisons, N. coffeae (ZHKUCC 23-0622) is different from N. chiangraiensis (MFLUCC 12-0559) by 50 / 494 bp (10 %, without gaps) of the ITS, 22 / 872 bp (2.5 %, without gaps) of the LSU, 16 / 943 bp (1.6 %, without gaps) of the SSU and 32 / 613 bp (5 %, without gaps) of the TEF 1 - α; In comparison, it is different from N. kaiyangensis (CGMCC 3.20404) in 42 / 467 bp (9 %, without gaps) of the ITS, 20 / 836 bp (2 %, without gaps) of the LSU, 16 / 1009 bp (1.5 %, without gaps) of the SSU, 42 / 963 bp (4 %, without gaps) of the TEF 1 - α and 88 / 886 bp (10 %, without gaps) of the RPB 2. In the BLASTn NCBI GenBank database search of ITS, LSU, SSU, RPB 2 and TEF 1 - α sequences, ITS results are similar to Brunneofusispora hyalina M. S. Calabon & K. D. Hyde, (MFLU 21-0016) with 90 % similarity, LSU is similar to N. trachycarpi X. D. Yu, S. N. Zhang & Jian K. Liu, (CGMCC 3.20405) with 98 % similarity, SSU is similar to Roussoella sp. (GMB 1323) with 93 % similarity, RPB 2 and TEF 1 - α results are similar to N. kaiyangensis (MFLUCC 17-2128) with 90 % and 96 % similarity, respectively. In addition, the PHI test results (Fig. 22 h) revealed no significant recombination relationships between N. coffeae and its phylogenetically related taxa. The morphological differences and phylogenetic analyses support the introduction of N. coffeae as a new species.

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Zenodo (CERN European Organization for Nuclear Research)
Published
2025-03-10
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https://doi.org/10.5281/zenodo.15785581
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Plant Pathogens and Fungal Diseases
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article

Neooccultibambusa coffeae L. Lu & Tibpromma 2025, sp. nov.

Zenodo (CERN European Organization for Nuclear Research)
Plant Pathogens and Fungal Diseases
article

Neooccultibambusa coffeae L. Lu & Tibpromma 2025, sp. nov.

article en

Abstract

Neooccultibambusa coffeae L. Lu & Tibpromma sp. nov. Fig. 16 Etymology. The species epithet “ coffeae ” refers to the host plant genus “ Coffea ” from which the fungus was isolated. Diagnosis. Differs from N. chiangraiensis and N. kaiyangensis X. D. Yu, S. N. Zhang & Jian K. Liu by the greyish-green ascospores. Holotype. HKAS 137604. Description. Saprobic on decaying branch of C. arabica. Teleomorph: Ascomata 140–180 × 200–250 µm (x- = 156 × 218 µm, n = 10), superficial to semi-immersed, solitary to gregarious, small, black spots on host surface, unilocular, globose or subglobose, some with ostiolate. Peridium 10–20 µm wide (x- = 15 µm, n = 20), outer walls comprising 2–4 layers of textura angularis cells, brown to dark brown, inner walls thin, hyaline and density. Hamathecium 2–4 µm wide (x- = 3.2 µm, n = 20), hyphae-like, hyaline, filiform, branched, pseudoparaphyses numerous. Asci 100–200 × 20–30 µm (x- = 156 × 24 µm, n = 20), 8 - spored, bitunicate, cylindrical-clavate, straight, with a short furcate, apically rounded, with an ocular chamber. Ascospores 30–40 × 8–12 µm (x- = 36.6 × 10.3 µm, n = 50), overlapping biseriate, hyaline when young, greyish-green when mature, fusoid or elliptical, 1–3 - septate, guttulate, smooth-walled, mucilaginous sheath present. Anamorph: Not observed. Culture characteristics. Ascospores germinating on PDA within 24 h, colonies reached 4 cm in diameter after two months at 25 ° C, mycelia superficial, filamentous, with filiform margin, flat, smooth, from above, brown at the centre, dark brown at the edge, from below, dark brown. Materials examined. China, Yunnan Province, Xishuangbanna, Pu’wen Town, on a decaying branch of Coffea arabica (Rubiaceae) (22°31'18"N, 101°2'44"E, 850 m alt.), 15 September 2021, LiLu, JHPW 13 (HKAS 137604, holotype), isotype MHZU 23-0056, ex-type living culture KUNCC 24-18351, ex-isotype living culture ZHKUCC 23-0622; China, Yunnan Province, Pu’er, on a decaying branch of C. arabica, (22°36'2"N, 101°0'59"E, 1015 m alt.), 16 September 2021, LiLu, Pu’er 1-5 (HKAS 137603, paratype), isoparatype MHZU 23-0057, ex-paratype living culture KUNCC 24-18353, ex-isoparatype living culture ZHKUCC 23-0624. Notes. In the concatenated phylogenetic analysis, Neooccultibambusa coffeae forms a distinct lineage within Neooccultibambusa, closely related to N. chiangraiensis and N. kaiyangensis (Fig. 17). Morphologically, the new species resembles N. chiangraiensis and N. kaiyangensis in shape, but differs in the colour of ascospores. The ascospores of N. coffeae are greyish-green when mature, while the ascospores of N. chiangraiensis and N. kaiyangensis are pale brown (Fig. 16; Doilom et al. (2017); Yu et al. (2021)). Based on nucleotide comparisons, N. coffeae (ZHKUCC 23-0622) is different from N. chiangraiensis (MFLUCC 12-0559) by 50 / 494 bp (10 %, without gaps) of the ITS, 22 / 872 bp (2.5 %, without gaps) of the LSU, 16 / 943 bp (1.6 %, without gaps) of the SSU and 32 / 613 bp (5 %, without gaps) of the TEF 1 - α; In comparison, it is different from N. kaiyangensis (CGMCC 3.20404) in 42 / 467 bp (9 %, without gaps) of the ITS, 20 / 836 bp (2 %, without gaps) of the LSU, 16 / 1009 bp (1.5 %, without gaps) of the SSU, 42 / 963 bp (4 %, without gaps) of the TEF 1 - α and 88 / 886 bp (10 %, without gaps) of the RPB 2. In the BLASTn NCBI GenBank database search of ITS, LSU, SSU, RPB 2 and TEF 1 - α sequences, ITS results are similar to Brunneofusispora hyalina M. S. Calabon & K. D. Hyde, (MFLU 21-0016) with 90 % similarity, LSU is similar to N. trachycarpi X. D. Yu, S. N. Zhang & Jian K. Liu, (CGMCC 3.20405) with 98 % similarity, SSU is similar to Roussoella sp. (GMB 1323) with 93 % similarity, RPB 2 and TEF 1 - α results are similar to N. kaiyangensis (MFLUCC 17-2128) with 90 % and 96 % similarity, respectively. In addition, the PHI test results (Fig. 22 h) revealed no significant recombination relationships between N. coffeae and its phylogenetically related taxa. The morphological differences and phylogenetic analyses support the introduction of N. coffeae as a new species.

Zenodo (CERN European Organization for Nuclear Research)
Agharkar Research Institute (IN), Mae Fah Luang University (TH), Qujing Normal University (CN), Chiang Mai University (TH)
Life in Land
Openalex Percentile: Top 48%
Plant Pathogens and Fungal Diseases
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