Unico: a unified model for cell-type resolution genomics from heterogeneous omics data

Most population-scale genomic datasets collected to date consist of ''bulk'' samples obtained from heterogeneous tissues, reflecting mixtures of different cell types. We introduce Unico, a unified cross-omics computational method designed to deconvolve standard two-dimensional bulk matrices (samples by features) into three-dimensional tensors (samples by features by cell types). Unico is the first principled model-based deconvolution method that is theoretically justified for any tissue-level genomic data, enhancing the ability to conduct powerful, large-scale genomic studies at cell-type resolution.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-10-18
DOI
https://doi.org/10.5281/zenodo.13952730
Citations
1
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.23
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article

Unico: a unified model for cell-type resolution genomics from heterogeneous omics data

1 citations
Zenodo (CERN European Organization for Nuclear Research)
Single-cell and spatial transcriptomics
0.23
article

Unico: a unified model for cell-type resolution genomics from heterogeneous omics data

article en
1 citations

Abstract

Most population-scale genomic datasets collected to date consist of ''bulk'' samples obtained from heterogeneous tissues, reflecting mixtures of different cell types. We introduce Unico, a unified cross-omics computational method designed to deconvolve standard two-dimensional bulk matrices (samples by features) into three-dimensional tensors (samples by features by cell types). Unico is the first principled model-based deconvolution method that is theoretically justified for any tissue-level genomic data, enhancing the ability to conduct powerful, large-scale genomic studies at cell-type resolution.

Zenodo (CERN European Organization for Nuclear Research)
University of California, Los Angeles (US)
Openalex Percentile: Top 39%
Single-cell and spatial transcriptomics
0.23
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