Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard

The Template Wizard at NanoSafety Data Interface https://search.data.enanomapper.net/ provides an user-friendly online form that allows users to select a specific end-point and to specify essential information about the experiment they will perform and for which they require a data (and associated metadata) capture template. Specific HTS_METADATA template allow users to annotate HTS experimental data with meaningful metadata while ensuring consistency and harmonization. The template for HTS metadata include the following sheets: 1. Front sheet Well address: Specific well address from used plate (e.g. A1, A2,...) Sample name: Select the sample name from the drop-down menu, or enter it if it is no available. Sample code: Internal sample code (if you used) in your laboratory. Concentration: Used material concentration in ug/ml. 2. Files Replicate: Specific experimental replicate (e.g. S1, S2, or R1, R2, or 1, 2 ......) Time: Treatment time (e.g. 24h, 2 days, ....) Endpoint: Specific endpoint (Cell-TiterGlo, AlamarBlue ....) This cell could contain endpoints separated by "," because a single file (e.g. received txt files from a high-content imaging station) could contain more than one endpoint. Cell: Treated cell line Date: Date of experiment (optional) Filename: filename with experimental results with extension. * The "Files sheet" can be automatically populated if the filenames follow this specific format: Replicate_time_endpoint_cell.extension

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-12-02
DOI
https://doi.org/10.5281/zenodo.14260136
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
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article

Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard

Zenodo (CERN European Organization for Nuclear Research)
Advanced Electron Microscopy Techniques and Applications
article

Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard

article en

Abstract

The Template Wizard at NanoSafety Data Interface https://search.data.enanomapper.net/ provides an user-friendly online form that allows users to select a specific end-point and to specify essential information about the experiment they will perform and for which they require a data (and associated metadata) capture template. Specific HTS_METADATA template allow users to annotate HTS experimental data with meaningful metadata while ensuring consistency and harmonization. The template for HTS metadata include the following sheets: 1. Front sheet Well address: Specific well address from used plate (e.g. A1, A2,...) Sample name: Select the sample name from the drop-down menu, or enter it if it is no available. Sample code: Internal sample code (if you used) in your laboratory. Concentration: Used material concentration in ug/ml. 2. Files Replicate: Specific experimental replicate (e.g. S1, S2, or R1, R2, or 1, 2 ......) Time: Treatment time (e.g. 24h, 2 days, ....) Endpoint: Specific endpoint (Cell-TiterGlo, AlamarBlue ....) This cell could contain endpoints separated by "," because a single file (e.g. received txt files from a high-content imaging station) could contain more than one endpoint. Cell: Treated cell line Date: Date of experiment (optional) Filename: filename with experimental results with extension. * The "Files sheet" can be automatically populated if the filenames follow this specific format: Replicate_time_endpoint_cell.extension

Zenodo (CERN European Organization for Nuclear Research)
Plovdiv University (BG), IDEAconsult (BG)
Openalex Percentile: Top 63%
Advanced Electron Microscopy Techniques and Applications
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Data entry template for High Throughput Screening (HTS) metadata, with links to data files - part of eNanoMapper Template Wizard · Zenodo (CERN European Organization for Nuclear Research) (2024) | TGRS Research Map | TGRS