Single-cell RNA sequencing datasets for "Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumours and breast cancer"

Single-cell RNA sequencing datasets for "Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumours and breast cancer" This repository contains KB1P mouse mammary tumour 10x Chromium datasets generated and analysed in our article: Demeter Túrós, Morgane Decollogny, Astrid Chanfon, Myriam Siffert, Lou Romanens, Jean-Christophe Tille, Olivier Tredan, Intidhar Labidi-Galy, Alberto Valdeolivas, and Sven Rottenberg."Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumours and breast cancer." GitHub: https://github.com/rottenberglab/residual-disease Archive Contents Mouse mammary tumour 10x Chromium datasets. Metadata CSV file is available in the dataset folder. In the cell_ranger_outputs folders, the Cell Ranger output files can be found for each sample. In the processed folder, a single AnnData object is stored as an h5ad file with cell type annotations and raw counts.