RAPiDock

This is RAPiDock version 2.0. Feel free to contact me if you have any questions. Here, we provide two pre-trained models for RAPiDock, tailored for local docking and global docking scenarios, respectively. Additionally, we offer several processed datasets, including two primary test sets for model performance evaluation: RefPepDB-RecentSet and PepSet (the latter derived from the work of Weng et al. http://cadd.zju.edu.cn/pepset/). We also provide datasets for extensive case analyses, covering four key application scenarios: PLK-PBD, SHP2, Import-a, and pHLA.