Principal Component Analysis (PCA) of the RNA-seq data demonstrating the reproducibility of the three biological replicates.

<p>Transformed raw counts (vst function from DESeq2 R package) per gene were used as variable for prcomp function from stats R package. PCA shows the samples in the 2D plane spanned by their first two principal components. Sample color is coded according to the experimental condition.</p> <p>(PDF)</p>

Publication Details

Journal
Figshare
Published
2024-11-04
DOI
https://doi.org/10.1371/journal.ppat.1012671.s014
Primary Topic
Mycorrhizal Fungi and Plant Interactions
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Principal Component Analysis (PCA) of the RNA-seq data demonstrating the reproducibility of the three biological replicates.

Figshare
Mycorrhizal Fungi and Plant Interactions
article

Principal Component Analysis (PCA) of the RNA-seq data demonstrating the reproducibility of the three biological replicates.

article en

Abstract

<p>Transformed raw counts (vst function from DESeq2 R package) per gene were used as variable for prcomp function from stats R package. PCA shows the samples in the 2D plane spanned by their first two principal components. Sample color is coded according to the experimental condition.</p> <p>(PDF)</p>

Figshare
Openalex Percentile: Top 47%
Mycorrhizal Fungi and Plant Interactions
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Principal Component Analysis (PCA) of the RNA-seq data demonstrating the reproducibility of the three biological replicates. · Figshare (2024) | TGRS Research Map | TGRS