Phyloprofile of lpt genes.

Phylogenetic profile of candidate genes showing ortholog presence ratios (fraction of isolates possessing at least one ortholog out of the total number of analyzed isolates; circle sizes) for selected lpt genes across Gammaproteobacteria orders. The color encodes the median feature architecture similarity (FAS score) between the protein in 19606 and its orthologs within an order. The dot color gradient (FAS_F; blue to orange) captures architecture differences using the 19606 protein as reference. The cell color gradient (FAS_B; white to pink) captures architecture differences using the ortholog as reference. The score decreases if features in reference are missing in the respective orthologs. (PDF)

Publication Details

Journal
Figshare
Published
2025-03-28
DOI
https://doi.org/10.1371/journal.pgen.1011642.s005
Primary Topic
Mycorrhizal Fungi and Plant Interactions
Type
article
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article

Phyloprofile of lpt genes.

Figshare
Mycorrhizal Fungi and Plant Interactions
article

Phyloprofile of lpt genes.

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Abstract

Phylogenetic profile of candidate genes showing ortholog presence ratios (fraction of isolates possessing at least one ortholog out of the total number of analyzed isolates; circle sizes) for selected lpt genes across Gammaproteobacteria orders. The color encodes the median feature architecture similarity (FAS score) between the protein in 19606 and its orthologs within an order. The dot color gradient (FAS_F; blue to orange) captures architecture differences using the 19606 protein as reference. The cell color gradient (FAS_B; white to pink) captures architecture differences using the ortholog as reference. The score decreases if features in reference are missing in the respective orthologs. (PDF)

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Openalex Percentile: Top 46%
Mycorrhizal Fungi and Plant Interactions
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Phyloprofile of lpt genes. · Figshare (2025) | TGRS Research Map | TGRS