Unlocking the Substrate\nAcceptance of Phenylalanine\nAmine Dehydrogenase Enables the Asymmetric Synthesis of Pharmaceutical <i>N</i>‑Heterocyclic Primary Amines

<i>N</i>-Heterocyclic primary amines are highly\nvaluable\nand recurrent synthons in the pharmaceutical industry. Amine dehydrogenase\n(AmDH)-catalyzed direct asymmetric reductive amination of the readily\navailable <i>N</i>-heterocyclic ketones represents a promising\napproach for synthesizing <i>N</i>-heterocyclic primary\namines. However, the limited substrate acceptance of AmDHs restricts\ntheir application in reductive amination. In this endeavor, we unlocked\nthe substrate acceptance of phenylalanine amine dehydrogenase from <i>Bacillus badius</i> (F-<i>Bb</i>AmDH) to access a\npanel of <i>N</i>-Boc-substituted heterocyclic ketones with\na broad range of structural features. Based on the combination of\na reverse substrate design strategy and structural-guided steric hindrance\nmutagenesis, two active F-<i>Bb</i>AmDH mutants with expanded <i>N</i>-heterocyclic ketone specificity toward <i>N</i>-Boc-3-piperidone were generated, and two rounds of additional iterative\nsite mutagenesis further increased the catalytic activity by 143.4-fold.\nThe optimal triple mutant M3-2 displayed a significantly extended\nscope of <i>N</i>-Boc-substituted heterocyclic ketones,\nand its practical asymmetric synthesis performance was confirmed in\nthe gram-scale synthesis of the key intermediate of alogliptin, (<i>R</i>)-1-Boc-3-piperidinamine, achieving >99% ee, 86% conversion,\nand 80% (4.0 g) isolated yield. This work lays the foundation for\nthe biocatalytic synthesis of structurally diverse <i>N</i>-heterocyclic primary amines and gives referable guidance for engineering\noxidoreductases sharing an analogous pocket into versatile biocatalysts.

Publication Details

Journal
Figshare
Published
2024-12-30
DOI
https://doi.org/10.1021/acscatal.4c06478.s001
Primary Topic
Enzyme Catalysis and Immobilization
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article
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article

Unlocking the Substrate\nAcceptance of Phenylalanine\nAmine Dehydrogenase Enables the Asymmetric Synthesis of Pharmaceutical N‑Heterocyclic Primary Amines

Figshare
Enzyme Catalysis and Immobilization
article

Unlocking the Substrate\nAcceptance of Phenylalanine\nAmine Dehydrogenase Enables the Asymmetric Synthesis of Pharmaceutical N‑Heterocyclic Primary Amines

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Abstract

<i>N</i>-Heterocyclic primary amines are highly\nvaluable\nand recurrent synthons in the pharmaceutical industry. Amine dehydrogenase\n(AmDH)-catalyzed direct asymmetric reductive amination of the readily\navailable <i>N</i>-heterocyclic ketones represents a promising\napproach for synthesizing <i>N</i>-heterocyclic primary\namines. However, the limited substrate acceptance of AmDHs restricts\ntheir application in reductive amination. In this endeavor, we unlocked\nthe substrate acceptance of phenylalanine amine dehydrogenase from <i>Bacillus badius</i> (F-<i>Bb</i>AmDH) to access a\npanel of <i>N</i>-Boc-substituted heterocyclic ketones with\na broad range of structural features. Based on the combination of\na reverse substrate design strategy and structural-guided steric hindrance\nmutagenesis, two active F-<i>Bb</i>AmDH mutants with expanded <i>N</i>-heterocyclic ketone specificity toward <i>N</i>-Boc-3-piperidone were generated, and two rounds of additional iterative\nsite mutagenesis further increased the catalytic activity by 143.4-fold.\nThe optimal triple mutant M3-2 displayed a significantly extended\nscope of <i>N</i>-Boc-substituted heterocyclic ketones,\nand its practical asymmetric synthesis performance was confirmed in\nthe gram-scale synthesis of the key intermediate of alogliptin, (<i>R</i>)-1-Boc-3-piperidinamine, achieving >99% ee, 86% conversion,\nand 80% (4.0 g) isolated yield. This work lays the foundation for\nthe biocatalytic synthesis of structurally diverse <i>N</i>-heterocyclic primary amines and gives referable guidance for engineering\noxidoreductases sharing an analogous pocket into versatile biocatalysts.

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