Dataset selection is critical for effective pre-training of fish detection models for underwater video

Abstract Underwater digital monitoring systems using acoustics and video have the potential to transform marine monitoring and fisheries stock assessment but generate significant amounts of data, shifting the burden from data collection to data analysis. Machine learning (ML) is a potential solution but remains underutilized for marine monitoring, partly due to the time and cost of annotating new training datasets for each marine class and habitat. This raises the pivotal question: “How can we train marine machine learning models with limited annotated data?” We catalog publicly available marine datasets annotated for detection and classification, investigating the feasibility of leveraging a fish detector trained on three existing datasets to detect fish in a new small underwater marine dataset. We compare the accuracy and training time of pre-trained models to those without pre-training. We find pre-training with OzFish yields faster convergence and comparable performance with smaller training datasets. However, pre-training with some datasets reduced performance and increased training time. We expect our catalog of publicly available marine datasets will assist in the selection of pre-training datasets. Our results underscore the need for diverse, large, publicly available marine datasets with varied habitat and class distributions to develop and integrate ML models into automated systems for monitoring marine ecosystems.

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Publication Details

Journal
ICES Journal of Marine Science
Published
2025-03-19
DOI
https://doi.org/10.1093/icesjms/fsaf039
Citations
2
Primary Topic
Mycorrhizal Fungi and Plant Interactions
Type
article
Field-Weighted Citation Impact
3.50

Funders

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article

Dataset selection is critical for effective pre-training of fish detection models for underwater video

2 citations
ICES Journal of Marine Science
Mycorrhizal Fungi and Plant Interactions
3.50
article

Dataset selection is critical for effective pre-training of fish detection models for underwater video

article en
2 citations

Abstract

Abstract Underwater digital monitoring systems using acoustics and video have the potential to transform marine monitoring and fisheries stock assessment but generate significant amounts of data, shifting the burden from data collection to data analysis. Machine learning (ML) is a potential solution but remains underutilized for marine monitoring, partly due to the time and cost of annotating new training datasets for each marine class and habitat. This raises the pivotal question: “How can we train marine machine learning models with limited annotated data?” We catalog publicly available marine datasets annotated for detection and classification, investigating the feasibility of leveraging a fish detector trained on three existing datasets to detect fish in a new small underwater marine dataset. We compare the accuracy and training time of pre-trained models to those without pre-training. We find pre-training with OzFish yields faster convergence and comparable performance with smaller training datasets. However, pre-training with some datasets reduced performance and increased training time. We expect our catalog of publicly available marine datasets will assist in the selection of pre-training datasets. Our results underscore the need for diverse, large, publicly available marine datasets with varied habitat and class distributions to develop and integrate ML models into automated systems for monitoring marine ecosystems.

ICES Journal of Marine ScienceVol. 82(4)
Dalhousie University (CA), Fisheries and Oceans Canada (CA), Indian Institute of Technology Jodhpur (IN), Community Sector Council Newfoundland and Labrador (CA), National Research Council Canada (CA)
Dalhousie University, Ocean Frontier Institute, Natural Sciences and Engineering Research Council of Canada
Life below water
Openalex Percentile: Top 7%
Mycorrhizal Fungi and Plant Interactions
3.50
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