Endogenous\nMessenger RNA-Stimulative Self-Enhanced\nOrthogonal Catalytic DNA Nanomachine under Near-Infrared Light Mediation\nfor High-Performance Imaging in Living Biosamples

While the higher assay sensitivity makes orthogonal catalytic\nDNA\nnanomachines promising for imaging analysis in living biosamples,\nthe absence of specific recognition components and the persistent\n“always-on” state for biomolecular identification hinder\ntheir further application. Hereby, we establish an endogenous mRNA\n(mRNA)-stimulative self-enhanced orthogonal catalytic DNA nanomachine\nmediated by near-infrared (NIR) light. Initially, a catalytic hairpin\nassembly and entropy-driven catalysis cascaded self-enhanced circuit\nis equipped with a component specific to TK1 mRNA recognition, enabling\nhighly selective sensing initiation. Furthermore, the interior of\na DNA segment is inserted with a photocleavable bond to lock the biomolecular\nidentification, followed by NIR light mediation of up-converting luminescence\nto avoid premature activation of the sensing system during biodelivery.\nBy selecting a cancer-correlated noncoding microRNA biomarker (miRNA-21)\nfor conceptual illustration, this newly devised DNA nanomachine exhibits\nremarkably sensitive sensing capability with good specificity in solution\ndetection. Delving deeper, our sensing methodology reliably achieves\nhigh-performance imaging of this low-abundance target in living biosamples,\ncovering both the cellular and <i>in vivo</i> levels. This\ndrives forward the advancement of DNA nanomachine-built fluorescent\nbiosensors in disease diagnosis.

Publication Details

Journal
Figshare
Published
2024-08-14
DOI
https://doi.org/10.1021/acs.analchem.4c02990.s001
Primary Topic
Mycorrhizal Fungi and Plant Interactions
Type
article
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article

Endogenous\nMessenger RNA-Stimulative Self-Enhanced\nOrthogonal Catalytic DNA Nanomachine under Near-Infrared Light Mediation\nfor High-Performance Imaging in Living Biosamples

Figshare
Mycorrhizal Fungi and Plant Interactions
article

Endogenous\nMessenger RNA-Stimulative Self-Enhanced\nOrthogonal Catalytic DNA Nanomachine under Near-Infrared Light Mediation\nfor High-Performance Imaging in Living Biosamples

article en

Abstract

While the higher assay sensitivity makes orthogonal catalytic\nDNA\nnanomachines promising for imaging analysis in living biosamples,\nthe absence of specific recognition components and the persistent\n“always-on” state for biomolecular identification hinder\ntheir further application. Hereby, we establish an endogenous mRNA\n(mRNA)-stimulative self-enhanced orthogonal catalytic DNA nanomachine\nmediated by near-infrared (NIR) light. Initially, a catalytic hairpin\nassembly and entropy-driven catalysis cascaded self-enhanced circuit\nis equipped with a component specific to TK1 mRNA recognition, enabling\nhighly selective sensing initiation. Furthermore, the interior of\na DNA segment is inserted with a photocleavable bond to lock the biomolecular\nidentification, followed by NIR light mediation of up-converting luminescence\nto avoid premature activation of the sensing system during biodelivery.\nBy selecting a cancer-correlated noncoding microRNA biomarker (miRNA-21)\nfor conceptual illustration, this newly devised DNA nanomachine exhibits\nremarkably sensitive sensing capability with good specificity in solution\ndetection. Delving deeper, our sensing methodology reliably achieves\nhigh-performance imaging of this low-abundance target in living biosamples,\ncovering both the cellular and <i>in vivo</i> levels. This\ndrives forward the advancement of DNA nanomachine-built fluorescent\nbiosensors in disease diagnosis.

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Mycorrhizal Fungi and Plant Interactions
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