FAISS-Based Semantic Search over Cleaned Clinical Trial Corpus using Sentence Transformers

This study presents a semantic search framework for clinical trials using sentence-transformer embeddings and FAISS vector indexing. By embedding cleaned metadata from thousands of trials, the model supports real-time retrieval of topically relevant studies. Each query yields interpretable outputs, including word clouds and PrettyTables of trial summaries. The system bridges raw clinical data and meaningful insights, helping researchers navigate vast biomedical corpora. Our lightweight architecture enables efficient querying without sacrificing interpretability, facilitating adoption in academic, regulatory, and industrial settings.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-07-23
DOI
https://doi.org/10.5281/zenodo.16369244
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.00
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article

FAISS-Based Semantic Search over Cleaned Clinical Trial Corpus using Sentence Transformers

Zenodo (CERN European Organization for Nuclear Research)
Biomedical Text Mining and Ontologies
article

FAISS-Based Semantic Search over Cleaned Clinical Trial Corpus using Sentence Transformers

article en

Abstract

This study presents a semantic search framework for clinical trials using sentence-transformer embeddings and FAISS vector indexing. By embedding cleaned metadata from thousands of trials, the model supports real-time retrieval of topically relevant studies. Each query yields interpretable outputs, including word clouds and PrettyTables of trial summaries. The system bridges raw clinical data and meaningful insights, helping researchers navigate vast biomedical corpora. Our lightweight architecture enables efficient querying without sacrificing interpretability, facilitating adoption in academic, regulatory, and industrial settings.

Zenodo (CERN European Organization for Nuclear Research)
Swiss School of Public Health (CH)
Quality Education
Openalex Percentile: Top 55%
Biomedical Text Mining and Ontologies
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