Setting-up a field experiment to collect data for the digital twin of crop growth

Setting-up a field experiment to collect data for the digital twin of crop growth Nevena Stevanović1*, Nikola Stanković1, Maša Buđen1, Marija Kopanja1, , Gordan Mimić1, , Miloš Pajić2, Nataša Ljubičić1, Sanja Brdar1, Hilde Vaessen3, Bernardo Maestrini3, Frits van Evert3 1 Centre for Biosystems and Centre for Information Technologies, BioSense Institute, University of Novi Sad, Novi Sad, Serbia2 Biotechnical and Information Engineering, Faculty of Agriculture, University of Belgrade, Belgrade, Serbia,3 Applied Ecology, Wageningen University & Research, Wageningen, Netherlands Gathering data on weather, soil conditions, and key plant growth parameters throughout the season enables running models for predicting crop growth and yield under specific abiotic conditions. The objective of this study was to set up a field experiment to collect data which could be used for the development of the digital twin. The purpose of the digital twin is to simulate crop growth in near-real time and adjust the state variables to reflect the situation in the field. The experiment was conducted in Čenej, Serbia, on a field where maize and soybean were cultivated. The field was divided into 12 different management zones based on multi-year average values of the NDVI and mechanical composition of the soil, with six zones designated for each crop. Soil samples were collected for detailed agrochemical analysis before sowing. Daily weather data were gathered from a meteorological station situated next to the field, together with the soil moisture sensors installed at different depths. Additionally, a set of three soil moisture sensors was placed in each zone. From the intensive growth phase onwards, biweekly data on in-situ measured Leaf Area Index (LAI), plant mass data and images from a drone with a multispectral camera were collected. Within each zone, insitu LAI measurements were conducted destructively, and leaf area was measured in laboratory conditions, using LI-3100C Area Meter. The yield data were obtained at harvest from a GPS-equipped yield monitor on the combine harvester. The study explored how collected data can be used for the creation of a digital twin of maize and soybean using the WOFOST crop growth model, version 7.1, with water-limited production. It is shown that the drone images that were collected were not suitable for the calculation of LAI due to the lack of specific red-edge band, required by the existing formula. Low-cost soil moisture sensors, placed at different zones, provided unreliable measurements, first due to discontinuity in sensing by losing internetconnection occasionally, and second having high standard deviation and values that did not match to the soil moisture measured at the station. However, the WOFOST simulation with data assimilation of in-situ measured LAI and station volumetric soil moisture content at 25 cm depth improved yield prediction. Root Mean Squared Error (RMSE) decreased from 1492.57 kg/ha to 1013.846 kg/ha for maize, and from 275.75 kg/ha to 240.66 kg/ha for soybean. Also, Mean Absolute Error (MAE) decreased from 1198.51 kg/ha to 872.82 kg/ha for maize, and from 240.71 kg/ha to 220.90 kg/ha for soybean.

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Publication Details

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Zenodo (CERN European Organization for Nuclear Research)
Published
2024-09-15
DOI
https://doi.org/10.5281/zenodo.15047352
Primary Topic
Greenhouse Technology and Climate Control
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article
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article

Setting-up a field experiment to collect data for the digital twin of crop growth

Zenodo (CERN European Organization for Nuclear Research)
Greenhouse Technology and Climate Control
article

Setting-up a field experiment to collect data for the digital twin of crop growth

article en

Abstract

Setting-up a field experiment to collect data for the digital twin of crop growth Nevena Stevanović1*, Nikola Stanković1, Maša Buđen1, Marija Kopanja1, , Gordan Mimić1, , Miloš Pajić2, Nataša Ljubičić1, Sanja Brdar1, Hilde Vaessen3, Bernardo Maestrini3, Frits van Evert3 1 Centre for Biosystems and Centre for Information Technologies, BioSense Institute, University of Novi Sad, Novi Sad, Serbia2 Biotechnical and Information Engineering, Faculty of Agriculture, University of Belgrade, Belgrade, Serbia,3 Applied Ecology, Wageningen University & Research, Wageningen, Netherlands Gathering data on weather, soil conditions, and key plant growth parameters throughout the season enables running models for predicting crop growth and yield under specific abiotic conditions. The objective of this study was to set up a field experiment to collect data which could be used for the development of the digital twin. The purpose of the digital twin is to simulate crop growth in near-real time and adjust the state variables to reflect the situation in the field. The experiment was conducted in Čenej, Serbia, on a field where maize and soybean were cultivated. The field was divided into 12 different management zones based on multi-year average values of the NDVI and mechanical composition of the soil, with six zones designated for each crop. Soil samples were collected for detailed agrochemical analysis before sowing. Daily weather data were gathered from a meteorological station situated next to the field, together with the soil moisture sensors installed at different depths. Additionally, a set of three soil moisture sensors was placed in each zone. From the intensive growth phase onwards, biweekly data on in-situ measured Leaf Area Index (LAI), plant mass data and images from a drone with a multispectral camera were collected. Within each zone, insitu LAI measurements were conducted destructively, and leaf area was measured in laboratory conditions, using LI-3100C Area Meter. The yield data were obtained at harvest from a GPS-equipped yield monitor on the combine harvester. The study explored how collected data can be used for the creation of a digital twin of maize and soybean using the WOFOST crop growth model, version 7.1, with water-limited production. It is shown that the drone images that were collected were not suitable for the calculation of LAI due to the lack of specific red-edge band, required by the existing formula. Low-cost soil moisture sensors, placed at different zones, provided unreliable measurements, first due to discontinuity in sensing by losing internetconnection occasionally, and second having high standard deviation and values that did not match to the soil moisture measured at the station. However, the WOFOST simulation with data assimilation of in-situ measured LAI and station volumetric soil moisture content at 25 cm depth improved yield prediction. Root Mean Squared Error (RMSE) decreased from 1492.57 kg/ha to 1013.846 kg/ha for maize, and from 275.75 kg/ha to 240.66 kg/ha for soybean. Also, Mean Absolute Error (MAE) decreased from 1198.51 kg/ha to 872.82 kg/ha for maize, and from 240.71 kg/ha to 220.90 kg/ha for soybean.

Zenodo (CERN European Organization for Nuclear Research)
University of Novi Sad (RS), University of Belgrade (RS), BioSense Institute (RS), Institute of Crop Science (JP), Wageningen University & Research (NL)
Openalex Percentile: Top 77%
Greenhouse Technology and Climate Control
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