Large Language Models for Bio-image Analysis

Large Language Models (LLMs) change the way how we do science, especially how we write scientific data analysis code. This talk starts with an introduction into the topic and into benchmarking LLMs for bio-image analysis code generation. I also explain two projects giving access to LLMs in a user-friendly manner: bia-bob and git-bob. Such tools facilitate the use of LLMs in scientific data analysis and code generation. I furthermore outline why competing with commercial LLM service providers in developing better models and systems is challenging and how we can profit from the developments these service providers achieve.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-09-26
DOI
https://doi.org/10.5281/zenodo.13845286
Primary Topic
Fungal and yeast genetics research
Type
article
Field-Weighted Citation Impact
0.00
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article

Large Language Models for Bio-image Analysis

Zenodo (CERN European Organization for Nuclear Research)
Fungal and yeast genetics research
article

Large Language Models for Bio-image Analysis

article en

Abstract

Large Language Models (LLMs) change the way how we do science, especially how we write scientific data analysis code. This talk starts with an introduction into the topic and into benchmarking LLMs for bio-image analysis code generation. I also explain two projects giving access to LLMs in a user-friendly manner: bia-bob and git-bob. Such tools facilitate the use of LLMs in scientific data analysis and code generation. I furthermore outline why competing with commercial LLM service providers in developing better models and systems is challenging and how we can profit from the developments these service providers achieve.

Zenodo (CERN European Organization for Nuclear Research)
Leipzig University (DE)
Industry, innovation and infrastructure
Openalex Percentile: Top 62%
Fungal and yeast genetics research
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Large Language Models for Bio-image Analysis · Zenodo (CERN European Organization for Nuclear Research) (2024) | TGRS Research Map | TGRS