2025-02-13 OpenEM Workshop

Slides from the 2024-02-13 OpenEM Workshop. This workshop deals with the status and implementation of the OpenEM project. OpenEM was launched in July 2023 and is funded by swissuniversities and the ETH Board. We would like to present the current status and gather ideas and feedback from all stakeholders across participating facilities. This is the right time to place ideas, change requests and feedback. The Open EM Data Network (OpenEM) is a consortium of Swiss electron microscopy facilities working together to: Improve Open Research Data (ORD) practices in the Swiss EM community Provide an open and FAIR repository for Swiss EM data not hosted elsewhere Standardize EM metadata & automate collection at Swiss EM facilities Follow a consistent data lifecycle when collecting data at different facilities Streamline publication of EM data into open repositories like EMPIAR, EMDB, and the PDB OpenEM will target both researchers producing EM data and consumers of open data for additional science. Data producers benefit from more streamlined data collection, standardized facilities, easier deposition for publication, and adherence to data management policies. The wider availability of open EM data brings numerous benefits, including reproducing results, applying new techniques to old data, training AI & other new methods, and mining data for new insights. Event information: https://indico.psi.ch/event/16514/

Institutions

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-02-13
DOI
https://doi.org/10.5281/zenodo.14937441
Primary Topic
Genetic and phenotypic traits in livestock
Type
article
Field-Weighted Citation Impact
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2025-02-13 OpenEM Workshop

Zenodo (CERN European Organization for Nuclear Research)
Genetic and phenotypic traits in livestock
article

2025-02-13 OpenEM Workshop

article en

Abstract

Slides from the 2024-02-13 OpenEM Workshop. This workshop deals with the status and implementation of the OpenEM project. OpenEM was launched in July 2023 and is funded by swissuniversities and the ETH Board. We would like to present the current status and gather ideas and feedback from all stakeholders across participating facilities. This is the right time to place ideas, change requests and feedback. The Open EM Data Network (OpenEM) is a consortium of Swiss electron microscopy facilities working together to: Improve Open Research Data (ORD) practices in the Swiss EM community Provide an open and FAIR repository for Swiss EM data not hosted elsewhere Standardize EM metadata & automate collection at Swiss EM facilities Follow a consistent data lifecycle when collecting data at different facilities Streamline publication of EM data into open repositories like EMPIAR, EMDB, and the PDB OpenEM will target both researchers producing EM data and consumers of open data for additional science. Data producers benefit from more streamlined data collection, standardized facilities, easier deposition for publication, and adherence to data management policies. The wider availability of open EM data brings numerous benefits, including reproducing results, applying new techniques to old data, training AI & other new methods, and mining data for new insights. Event information: https://indico.psi.ch/event/16514/

Zenodo (CERN European Organization for Nuclear Research)
University of Bern (CH), University of Basel (CH), Paul Scherrer Institute (CH), ETH Zurich (CH), École Polytechnique Fédérale de Lausanne (CH), Swiss Federal Laboratories for Materials Science and Technology (CH)
Industry, innovation and infrastructure
Openalex Percentile: Top 51%
Genetic and phenotypic traits in livestock
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