The piscem index

This manuscript provides a brief overview of the piscem index — a fast and compact index for the compacted, colored, reference (i.e., storing positional information about the input references) de Bruijn graph — which is used across several tools, but for which a complete manuscript is still in preparation. This document is meant to act as an informative technical description of the main index and its features.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-03-27
DOI
https://doi.org/10.5281/zenodo.15096902
Primary Topic
History and advancements in chemistry
Type
article
Field-Weighted Citation Impact
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article

The piscem index

Zenodo (CERN European Organization for Nuclear Research)
History and advancements in chemistry
article

The piscem index

article en

Abstract

This manuscript provides a brief overview of the piscem index — a fast and compact index for the compacted, colored, reference (i.e., storing positional information about the input references) de Bruijn graph — which is used across several tools, but for which a complete manuscript is still in preparation. This document is meant to act as an informative technical description of the main index and its features.

Zenodo (CERN European Organization for Nuclear Research)
Ca' Foscari University of Venice (IT), University of Maryland, College Park (US)
Openalex Percentile: Top 56%
History and advancements in chemistry
DOIOpen Access PDFOpenAlex
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The piscem index · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS