Many-body theory of antimatter interactions with molecules

Antimatter particles have the same mass but opposite electrical charges to their ordinary matter counterparts. Antimatter quickly annihilates in contact with ordinary matter - that is particle/antiparticle pairs are destroyed and an equivalent amount of energy is emitted. This property is used in current applications of positrons (anti-electrons) such as PET scans in hospitals and technology for characterisation of new materials. This eCSE project focusses on profiling, optimisation and enhancement of “EXCITON+”, a new and currently unrivalled code developed by project PI Dermot Green’s group since 2020 for ab initio many-body theory calculations of antimatter interactions with atoms and molecules. EXCITON+ is built on the underlying all-electron EXCITON code (authored by Co-I Charles Patterson). EXCITON+ can calculate positron binding energies, annihilation rates and Doppler-broadened annihilation gamma spectra with first principles ab initio inclusion of important positron-molecule correlations including polarization and virtual-positronium formation. Its first application resulted in quantitative understanding of a long-standing question of positron binding in polyatomic molecules [Hofierka et al, 2022, Nature 606, 688-693]. Here, we report on progress made on profiling and targeted optimization of EXCITON+ coding, with particular emphasis on opportunities for nested MPI/OpenMP parallelism and passive remote memory access to distribute parallelized tasks. Ongoing performance-enhancing work to introduce point group symmetry-aware calculation of molecular leptonic (positron + electrons) integrals is described. The overall aim is to ensure that EXCITON+ modules are computationally as efficient and future proof as the scientific content of the code is ground-breaking and comprehensive.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-05-14
DOI
https://doi.org/10.5281/zenodo.15576524
Primary Topic
Monoclonal and Polyclonal Antibodies Research
Type
article
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article

Many-body theory of antimatter interactions with molecules

Zenodo (CERN European Organization for Nuclear Research)
Monoclonal and Polyclonal Antibodies Research
article

Many-body theory of antimatter interactions with molecules

article en

Abstract

Antimatter particles have the same mass but opposite electrical charges to their ordinary matter counterparts. Antimatter quickly annihilates in contact with ordinary matter - that is particle/antiparticle pairs are destroyed and an equivalent amount of energy is emitted. This property is used in current applications of positrons (anti-electrons) such as PET scans in hospitals and technology for characterisation of new materials. This eCSE project focusses on profiling, optimisation and enhancement of “EXCITON+”, a new and currently unrivalled code developed by project PI Dermot Green’s group since 2020 for ab initio many-body theory calculations of antimatter interactions with atoms and molecules. EXCITON+ is built on the underlying all-electron EXCITON code (authored by Co-I Charles Patterson). EXCITON+ can calculate positron binding energies, annihilation rates and Doppler-broadened annihilation gamma spectra with first principles ab initio inclusion of important positron-molecule correlations including polarization and virtual-positronium formation. Its first application resulted in quantitative understanding of a long-standing question of positron binding in polyatomic molecules [Hofierka et al, 2022, Nature 606, 688-693]. Here, we report on progress made on profiling and targeted optimization of EXCITON+ coding, with particular emphasis on opportunities for nested MPI/OpenMP parallelism and passive remote memory access to distribute parallelized tasks. Ongoing performance-enhancing work to introduce point group symmetry-aware calculation of molecular leptonic (positron + electrons) integrals is described. The overall aim is to ensure that EXCITON+ modules are computationally as efficient and future proof as the scientific content of the code is ground-breaking and comprehensive.

Zenodo (CERN European Organization for Nuclear Research)
Queen's University Belfast (GB), Trinity College (CA), Trinity College Dublin (IE), Daresbury Laboratory (GB)
Industry, innovation and infrastructure
Openalex Percentile: Top 41%
Monoclonal and Polyclonal Antibodies Research
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Many-body theory of antimatter interactions with molecules · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS