Translation of Deoxyribonucleic\nAcid into Synthetic\nAlpha Helical Peptides for Darwinian Evolution

DNA-encoded libraries connect the phenotypes of synthetic\nmolecules\nto a DNA barcode; however, most libraries do not tap into the potential\nof Darwinian evolution. Herein, we report a DNA-templated synthesis\n(DTS) architecture to make peptides that are stabilized into α-helical\nconformations via head-to-tail supramolecular cyclization. Using a\npilot library targeting MDM2, we show that repeated screening can\namplify a binder from the lowest abundance in the library to a ranking\nthat correlates to binding affinity. The study also highlights the\nneed to design libraries such that the chemistry avoids biases from\nthe heterogeneous yield in DTS.

Publication Details

Journal
Figshare
Published
2024-10-02
DOI
https://doi.org/10.1021/jacsau.4c00738.s001
Primary Topic
Chemical Synthesis and Analysis
Type
article
Field-Weighted Citation Impact
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article

Translation of Deoxyribonucleic\nAcid into Synthetic\nAlpha Helical Peptides for Darwinian Evolution

Figshare
Chemical Synthesis and Analysis
article

Translation of Deoxyribonucleic\nAcid into Synthetic\nAlpha Helical Peptides for Darwinian Evolution

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Abstract

DNA-encoded libraries connect the phenotypes of synthetic\nmolecules\nto a DNA barcode; however, most libraries do not tap into the potential\nof Darwinian evolution. Herein, we report a DNA-templated synthesis\n(DTS) architecture to make peptides that are stabilized into α-helical\nconformations via head-to-tail supramolecular cyclization. Using a\npilot library targeting MDM2, we show that repeated screening can\namplify a binder from the lowest abundance in the library to a ranking\nthat correlates to binding affinity. The study also highlights the\nneed to design libraries such that the chemistry avoids biases from\nthe heterogeneous yield in DTS.

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Chemical Synthesis and Analysis
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Translation of Deoxyribonucleic\nAcid into Synthetic\nAlpha Helical Peptides for Darwinian Evolution · Figshare (2024) | TGRS Research Map | TGRS