Explicit stabilized multirate methods for the monodomain model in cardiac electrophysiology

Fully explicit stabilized multirate (mRKC) methods are well-suited for the numerical solution of large multiscale systems of stiff ordinary differential equations thanks to their improved stability properties. To demonstrate their efficiency for the numerical solution of stiff, multiscale, nonlinear parabolic PDE’s, we apply mRKC methods to the monodomain equation from cardiac electrophysiology. In doing so, we propose an improved version, specifically tailored to the monodomain model, which leads to the explicit exponential multirate stabilized (emRKC) method. Several numerical experiments are conducted to evaluate the efficiency of both mRKC and emRKC, while taking into account different finite element meshes (structured and unstructured) and realistic ionic models. The new emRKC method typically outperforms a standard implicit-explicit baseline method for cardiac electrophysiology. Code profiling and strong scalability results further demonstrate that emRKC is faster and inherently parallel without sacrificing accuracy.

Publication Details

Journal
Springer Link (Chiba Institute of Technology)
Published
2024-12-04
DOI
https://doi.org/10.1051/m2an/2024030/pdf
Primary Topic
Nonlinear Dynamics and Pattern Formation
Type
article
Field-Weighted Citation Impact
0.00

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article

Explicit stabilized multirate methods for the monodomain model in cardiac electrophysiology

Springer Link (Chiba Institute of Technology)
Nonlinear Dynamics and Pattern Formation
article

Explicit stabilized multirate methods for the monodomain model in cardiac electrophysiology

article en

Abstract

Fully explicit stabilized multirate (mRKC) methods are well-suited for the numerical solution of large multiscale systems of stiff ordinary differential equations thanks to their improved stability properties. To demonstrate their efficiency for the numerical solution of stiff, multiscale, nonlinear parabolic PDE’s, we apply mRKC methods to the monodomain equation from cardiac electrophysiology. In doing so, we propose an improved version, specifically tailored to the monodomain model, which leads to the explicit exponential multirate stabilized (emRKC) method. Several numerical experiments are conducted to evaluate the efficiency of both mRKC and emRKC, while taking into account different finite element meshes (structured and unstructured) and realistic ionic models. The new emRKC method typically outperforms a standard implicit-explicit baseline method for cardiac electrophysiology. Code profiling and strong scalability results further demonstrate that emRKC is faster and inherently parallel without sacrificing accuracy.

Springer Link (Chiba Institute of Technology)
European Commission, Centro Svizzero di Calcolo Scientifico, National Supercomputing Centre Singapore, Staatssekretariat für Bildung, Forschung und Innovation
Openalex Percentile: Top 57%
Nonlinear Dynamics and Pattern Formation
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