"Rho-kinase inhibition reduces subretinal fibrosis" IMC dataset

This upload contains the raw and processed IMC dataset from the publication. The files include: Raw IMC dataset in the archive "imc_raw.zip" Segmentation masks for each slide obtained used steinpose napari plugin in "masks.zip", cellpose v2 parameters included Processed with steinbock package raw R dataset in "spe_raw.rds" Manual cell annotation table in "annotation_manual.zip", parameters included Layer annotation QuPath project in "qproject_layers.zip" Fully analyzed R dataset in "spe_final.rds" Analysis script in "project_script.R" Differential abundance and state results in "differential_abundance.xlsx" and "differential_state.xlsx"