Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota

This is the Zenodo for the publication Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota. The files found in this repository are the following: chapter1-4.Rmd: Rmarkdown files containing downstream analyises and code to recreate plots of the manuscript. useful_func.R: R script containing some functions used in the other scripts. bipartite_netwoek_analysis.R: script containing some function for the PBIN analysis data.zip: Directory containing all the necessary data run the R scripts (This files are generated following the github pipeline in repo liked to this zenodo). Figures.zip: Directory containing all the figures (raw and modified for publication). MAGs.zip: directory containing all the bacterial MAGs. vMAGs.zip: directory containing all the viral MAGs

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-07-30
DOI
https://doi.org/10.5281/zenodo.16036761
Primary Topic
Insect and Pesticide Research
Type
article
Field-Weighted Citation Impact
0.00
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article

Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota

Zenodo (CERN European Organization for Nuclear Research)
Insect and Pesticide Research
article

Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota

article en

Abstract

This is the Zenodo for the publication Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota. The files found in this repository are the following: chapter1-4.Rmd: Rmarkdown files containing downstream analyises and code to recreate plots of the manuscript. useful_func.R: R script containing some functions used in the other scripts. bipartite_netwoek_analysis.R: script containing some function for the PBIN analysis data.zip: Directory containing all the necessary data run the R scripts (This files are generated following the github pipeline in repo liked to this zenodo). Figures.zip: Directory containing all the figures (raw and modified for publication). MAGs.zip: directory containing all the bacterial MAGs. vMAGs.zip: directory containing all the viral MAGs

Zenodo (CERN European Organization for Nuclear Research)
University of Lausanne (CH)
Openalex Percentile: Top 60%
Insect and Pesticide Research
DOIOpen Access PDFOpenAlex
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Phage diversity mirrors bacterial strain diversity in the honey bee gut microbiota · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS