Improving Computational Reproducibility at Amsterdam UMC

The crisis of computational reproducibility in medical science is well documented. There is not one single source of this crisis, but a number of these issues originate directly from software usage and development, such as programming literacy, version control, and documentation. At Amsterdam UMC, we are undertaking a number of initiatives to raise awareness about these issues and provide ways to improve computational reproducibility across the university. Activities include a reproducibility hackathon event (ReproHack), hands-on coding support, the development of IT infrastructure and dedicated training sessions. This poster summarizes our initiatives for the purposes of gaining feedback, sharing ideas and facilitating a discussion among fellow attendees.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-12-12
DOI
https://doi.org/10.5281/zenodo.14418870
Primary Topic
Scientific Computing and Data Management
Type
article
Field-Weighted Citation Impact
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article

Improving Computational Reproducibility at Amsterdam UMC

Zenodo (CERN European Organization for Nuclear Research)
Scientific Computing and Data Management
article

Improving Computational Reproducibility at Amsterdam UMC

article en

Abstract

The crisis of computational reproducibility in medical science is well documented. There is not one single source of this crisis, but a number of these issues originate directly from software usage and development, such as programming literacy, version control, and documentation. At Amsterdam UMC, we are undertaking a number of initiatives to raise awareness about these issues and provide ways to improve computational reproducibility across the university. Activities include a reproducibility hackathon event (ReproHack), hands-on coding support, the development of IT infrastructure and dedicated training sessions. This poster summarizes our initiatives for the purposes of gaining feedback, sharing ideas and facilitating a discussion among fellow attendees.

Zenodo (CERN European Organization for Nuclear Research)
Amsterdam UMC Location Vrije Universiteit Amsterdam (NL)
Quality Education
Openalex Percentile: Top 45%
Scientific Computing and Data Management
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