How to make Biomedical Imaging Datasets AI-ready?

The vast amount of observations needed to train new generation AI models (Foundation Models) necessitates a strategy of combining data from multiple repositories in a semi-automatic way to minimize human involvement. However, many public data sources present challenges such as inhomogeneity, lack of machine-actionable data, and manual access barriers. These issues can be mitigated through the consequent adherence to the FAIR (Findable, Accessible, Interoperable, Reusable) data principles, as well as state-of-the-art data standards and tools. In the poster, we highlight the inhomogeneity of the schema definitions in the field, provide helpful tips on what could improve the AI-readiness of data and inspect example data sources which implement the most novel concepts in working with data and metadata in the machine-actionable fashion.

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-11-04
DOI
https://doi.org/10.5281/zenodo.14041301
Primary Topic
Scientific Computing and Data Management
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

How to make Biomedical Imaging Datasets AI-ready?

Zenodo (CERN European Organization for Nuclear Research)
Scientific Computing and Data Management
article

How to make Biomedical Imaging Datasets AI-ready?

article en

Abstract

The vast amount of observations needed to train new generation AI models (Foundation Models) necessitates a strategy of combining data from multiple repositories in a semi-automatic way to minimize human involvement. However, many public data sources present challenges such as inhomogeneity, lack of machine-actionable data, and manual access barriers. These issues can be mitigated through the consequent adherence to the FAIR (Findable, Accessible, Interoperable, Reusable) data principles, as well as state-of-the-art data standards and tools. In the poster, we highlight the inhomogeneity of the schema definitions in the field, provide helpful tips on what could improve the AI-readiness of data and inspect example data sources which implement the most novel concepts in working with data and metadata in the machine-actionable fashion.

Zenodo (CERN European Organization for Nuclear Research)
Openalex Percentile: Top 46%
Scientific Computing and Data Management
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.