Clinical Bioinformatics desiderata for Molecular Tumor Boards

Clinical Bioinformatics is a knowledge framework required to interpret data of medical interest via computational methods. This area became of dramatic importance in Precision Oncology, fueled by cancer genomic profiling: most definitions of Molecular Tumor Boards require the presence of bioinformaticians. However, all available literature remained rather vague on what are the specific needs in terms of digital tools and expertise to tackle and interpret genomics data to assign novel targeted or biomarker-driven targeted therapies to cancer patients. To fill this gap, in this article we present a catalogue of Software Families and Human Skills required for the Tumor Board Bioinformatician, with specific examples on real-world applications associated with each element presented.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-08-30
DOI
https://doi.org/10.5281/zenodo.10389605
Primary Topic
Cancer Genomics and Diagnostics
Type
article
Field-Weighted Citation Impact
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article

Clinical Bioinformatics desiderata for Molecular Tumor Boards

Zenodo (CERN European Organization for Nuclear Research)
Cancer Genomics and Diagnostics
article

Clinical Bioinformatics desiderata for Molecular Tumor Boards

article en

Abstract

Clinical Bioinformatics is a knowledge framework required to interpret data of medical interest via computational methods. This area became of dramatic importance in Precision Oncology, fueled by cancer genomic profiling: most definitions of Molecular Tumor Boards require the presence of bioinformaticians. However, all available literature remained rather vague on what are the specific needs in terms of digital tools and expertise to tackle and interpret genomics data to assign novel targeted or biomarker-driven targeted therapies to cancer patients. To fill this gap, in this article we present a catalogue of Software Families and Human Skills required for the Tumor Board Bioinformatician, with specific examples on real-world applications associated with each element presented.

Zenodo (CERN European Organization for Nuclear Research)
Vita-Salute San Raffaele University (IT), Institute of Experimental Endocrinology of the Slovak Academy of Sciences (SK), Institute for Experimental Endocrinology and Oncology (IT), Tumori Foundation (US), Istituti di Ricovero e Cura a Carattere Scientifico (IT), Instituto Nazionale Tumori Regina Elena (IT), Istituto di Ricovero e Cura a Carattere Scientifico San Raffaele (IT), European Institute of Oncology (IT)
Quality Education
Openalex Percentile: Top 61%
Cancer Genomics and Diagnostics
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