Harmony analysis pipeline for measuring spheroid, cell and subcellular morphological features.

<p>Analysis pipeline describes the building blocks and the thresholds used to segment spheroids, cells, Golgi, endosomes and lysosomes. The building block in orange ‘Select Population’ is used only in parental cells to give parental and GFP cells a consistent population name. The building blocks in green were used to select EGFP-expressing cells. The ‘Filter Image (2)’ and ‘Find Image Region (3)’ building blocks provide endosome (light blue) and lysosome (purple) specific thresholds.</p> <p>(PDF)</p>

Publication Details

Journal
Figshare
Published
2024-11-12
DOI
https://doi.org/10.1371/journal.pone.0311963.s006
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
0.00
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article

Harmony analysis pipeline for measuring spheroid, cell and subcellular morphological features.

Figshare
Cell Image Analysis Techniques
article

Harmony analysis pipeline for measuring spheroid, cell and subcellular morphological features.

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Abstract

<p>Analysis pipeline describes the building blocks and the thresholds used to segment spheroids, cells, Golgi, endosomes and lysosomes. The building block in orange ‘Select Population’ is used only in parental cells to give parental and GFP cells a consistent population name. The building blocks in green were used to select EGFP-expressing cells. The ‘Filter Image (2)’ and ‘Find Image Region (3)’ building blocks provide endosome (light blue) and lysosome (purple) specific thresholds.</p> <p>(PDF)</p>

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Cell Image Analysis Techniques
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Harmony analysis pipeline for measuring spheroid, cell and subcellular morphological features. · Figshare (2024) | TGRS Research Map | TGRS