Site-occupancy detection model estimates and habitat covariates.

Posterior mean and 95% credible interval (CI) for model regression coefficients: probability of eDNA site occupancy (ψ), true capture (θ<sub>11</sub>), false-positive inference capture (θ<sub>10</sub>), true detection (p<sub>11</sub>), and false-positive test detection (p<sub>10</sub>). Posterior inclusion probabilities (PIP, or proportion of iterations included in the model) of covariates linked to each parameter are also included. Model covariates included visual benthic cover, site depth, site position (X-Y coordinates), sample year, and the interaction of benthic cover and site depth (Cover:Depth) and position coordinates (X:Y). Coefficients with CIs that do not overlap zero and model covariates with PIP > 0.5 (the threshold applied to the most important model predictors, [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0318414#pone.0318414.ref038" target="_blank">38</a>]), are bolded. The probability of absence (1-ψ), capture false-negative (1-θ<sub>11</sub>), capture true-negative (1-θ<sub>10</sub>), false-negative detection (1-p<sub>11</sub>), and true-negative detection (1-p<sub>10</sub>) are the complements of ψ, θ<sub>11</sub>, θ<sub>10</sub>, p<sub>11</sub>, and p<sub>10</sub>, respectively. (DOCX)

Publication Details

Journal
Figshare
Published
2025-02-04
DOI
https://doi.org/10.1371/journal.pone.0318414.s005
Primary Topic
Census and Population Estimation
Type
article
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article

Site-occupancy detection model estimates and habitat covariates.

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Census and Population Estimation
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Site-occupancy detection model estimates and habitat covariates.

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Abstract

Posterior mean and 95% credible interval (CI) for model regression coefficients: probability of eDNA site occupancy (ψ), true capture (θ<sub>11</sub>), false-positive inference capture (θ<sub>10</sub>), true detection (p<sub>11</sub>), and false-positive test detection (p<sub>10</sub>). Posterior inclusion probabilities (PIP, or proportion of iterations included in the model) of covariates linked to each parameter are also included. Model covariates included visual benthic cover, site depth, site position (X-Y coordinates), sample year, and the interaction of benthic cover and site depth (Cover:Depth) and position coordinates (X:Y). Coefficients with CIs that do not overlap zero and model covariates with PIP > 0.5 (the threshold applied to the most important model predictors, [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0318414#pone.0318414.ref038" target="_blank">38</a>]), are bolded. The probability of absence (1-ψ), capture false-negative (1-θ<sub>11</sub>), capture true-negative (1-θ<sub>10</sub>), false-negative detection (1-p<sub>11</sub>), and true-negative detection (1-p<sub>10</sub>) are the complements of ψ, θ<sub>11</sub>, θ<sub>10</sub>, p<sub>11</sub>, and p<sub>10</sub>, respectively. (DOCX)

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