Genomic annotation of the top 500 SNPs from classification-based GWAS conducted on three different planes—axial, coronal, and sagittal.

<p>Overall, 1301 unique SNPs were annotated. <b>(A)</b> Venn diagram displaying overlap among the three lists of top 500 SNPs ranked by macro F1 score. <b>(B)</b> Venn diagram illustrating the overlap among the three lists of genes close to the top 500 SNPs. <b>(C)</b> Pie charts showing the proportion of variant types among all the top SNPs annotated. <b>(D)</b> Histogram of macro F1 values for all SNPs in the axial, coronal, and sagittal planes.</p> <p>(PDF)</p>

Publication Details

Journal
Figshare
Published
2024-10-15
DOI
https://doi.org/10.1371/journal.pcbi.1012527.s005
Primary Topic
Genetic Associations and Epidemiology
Type
article
Field-Weighted Citation Impact
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article

Genomic annotation of the top 500 SNPs from classification-based GWAS conducted on three different planes—axial, coronal, and sagittal.

Figshare
Genetic Associations and Epidemiology
article

Genomic annotation of the top 500 SNPs from classification-based GWAS conducted on three different planes—axial, coronal, and sagittal.

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Abstract

<p>Overall, 1301 unique SNPs were annotated. <b>(A)</b> Venn diagram displaying overlap among the three lists of top 500 SNPs ranked by macro F1 score. <b>(B)</b> Venn diagram illustrating the overlap among the three lists of genes close to the top 500 SNPs. <b>(C)</b> Pie charts showing the proportion of variant types among all the top SNPs annotated. <b>(D)</b> Histogram of macro F1 values for all SNPs in the axial, coronal, and sagittal planes.</p> <p>(PDF)</p>

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Genetic Associations and Epidemiology
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Genomic annotation of the top 500 SNPs from classification-based GWAS conducted on three different planes—axial, coronal, and sagittal. · Figshare (2024) | TGRS Research Map | TGRS