More details on cis- <i>vs.</i> trans-regulation of iSoMAs genes.

(A) Detailed chromosome distribution and chromosome preference profiles of top 100 target isoforms of representative iSoMAs genes TP53 (left) and KRAS (right) across cancer types. P-values were derived from KS test for chromosome preference and are indicated above corresponding cancer types. Lhg19: the chromosome length distribution of the 24 chromosomes; Niso: number distribution of all isoforms across the 24 chromosomes. (B) Schematic of the hypergeometric test performed to determine cis-regulation of iSoMAs genes. (C) Number of cis-regulation iSoMAs genes determined at various significance levels for each cancer type as indicated. The cancer types, together with the number of iSoMAs genes with <i>P</i>>0.999 (potentially trans-regulation iSoMAs genes) and the number of all iSoMAs genes detected in each cancer type are indicated in the x-axis. (DOCX)

Publication Details

Journal
Figshare
Published
2025-03-07
DOI
https://doi.org/10.1371/journal.pcbi.1012847.s003
Primary Topic
Protease and Inhibitor Mechanisms
Type
article
Field-Weighted Citation Impact
0.00
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article

More details on cis- vs. trans-regulation of iSoMAs genes.

Figshare
Protease and Inhibitor Mechanisms
article

More details on cis- vs. trans-regulation of iSoMAs genes.

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Abstract

(A) Detailed chromosome distribution and chromosome preference profiles of top 100 target isoforms of representative iSoMAs genes TP53 (left) and KRAS (right) across cancer types. P-values were derived from KS test for chromosome preference and are indicated above corresponding cancer types. Lhg19: the chromosome length distribution of the 24 chromosomes; Niso: number distribution of all isoforms across the 24 chromosomes. (B) Schematic of the hypergeometric test performed to determine cis-regulation of iSoMAs genes. (C) Number of cis-regulation iSoMAs genes determined at various significance levels for each cancer type as indicated. The cancer types, together with the number of iSoMAs genes with <i>P</i>>0.999 (potentially trans-regulation iSoMAs genes) and the number of all iSoMAs genes detected in each cancer type are indicated in the x-axis. (DOCX)

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Openalex Percentile: Top 49%
Protease and Inhibitor Mechanisms
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