Comparison of divergence patterns for HTR regions to those of background genome regions.

<p>Phylogenetic divergence relative to single copy ortholog gene trees. <i>D_Fx</i> = mean pairwise divergence among <i>F</i>. <i>xylarioides</i> genomes for given HTR (substitutions. per site). <i>D_Fo</i> = mean pairwise divergence among <i>F</i>. <i>oxysporum</i> genomes for a given HTR. <i>D_FxFo</i> = minimum pairwise divergence between <i>F</i>. <i>xylarioides</i> HTR and closest <i>F</i>. <i>oxysporum</i> match. p = proportion of values of <i>D_FxFo</i> across single ortholog gene trees ≤ the observed value of <i>D_FxFo</i> for the HTR. Mean <i>D_FxFo</i> across single ortholog gene trees = 0.067, 95% range 0.024–0.153 substitutions per site.</p> <p>(PDF)</p>