Synthesis, BiologicalProperties, In Silico ADME,Molecular Docking Studies, and FMO Analysis of Chalcone Derivativesas Promising Antioxidant and Antimicrobial Agents

A series of chalcone derivatives were synthesized and characterized using UV–vis, FT-IR, <sup>1</sup>H NMR, and mass spectrometry, followed by the evaluation of their antimicrobial and antioxidant properties. <i>In vitro</i> screening against six bacterial strains (Staphylococcus aureus, Bacillus subtilis, Salmonella typhimurium, Escherichia coli, Pseudomonas aeruginosa, and Citrobacter freundii) and two fungal strains (Aspergillus niger and Trichoderma harzianum) revealed outstanding antibacterial activities, particularly with compound <b>5b</b>, <b>5d</b>, and <b>5e</b> against S. aureus, and compounds <b>5c</b> and <b>5h</b> against B. subtilis. Notably, compounds <b>5f</b> and <b>5g</b> exhibited significant effects against P. aeruginosa, while compound <b>5b</b> showed the highest antifungal activity against T. harzianum. All compounds demonstrated remarkable antioxidant activities, with <b>5h</b> (IC<sub>50</sub> values of 0.005 μM) and <b>5c</b> (IC<sub>50</sub> values of 0.006 μM) being the most potent, comparable to ascorbic acid (IC<sub>50</sub> values of 0.007 μM). <i>In silico</i> evaluations confirmed favorable drug-likeness and pharmacokinetic properties for all analogues, adhering to both Lipinski’s rule of Five and Veber’s rule. Molecular docking studies of potent antibacterial compounds (<b>5e</b> and <b>5h</b>) indicated strong binding affinities to the PBP-1b receptor in S. aureus, while DFT calculations provided valuable insights into their molecular reactivity and biological properties. Ligand-based enzymatic target predictions indicate that chalcone analogues (<b>5a–m</b>) show potential as inhibitors of oxidoreductases, kinases, enzymes, proteases, or ligands for family A GPCR. These findings position chalcone derivatives as promising candidates for therapeutic applications in combating bacterial infections and oxidative stress.

Publication Details

Journal
Figshare
Published
2025-01-28
DOI
https://doi.org/10.1021/acsomega.4c06897.s001
Primary Topic
Synthesis and biological activity
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article
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article

Synthesis, BiologicalProperties, In Silico ADME,Molecular Docking Studies, and FMO Analysis of Chalcone Derivativesas Promising Antioxidant and Antimicrobial Agents

Figshare
Synthesis and biological activity
article

Synthesis, BiologicalProperties, In Silico ADME,Molecular Docking Studies, and FMO Analysis of Chalcone Derivativesas Promising Antioxidant and Antimicrobial Agents

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Abstract

A series of chalcone derivatives were synthesized and characterized using UV–vis, FT-IR, <sup>1</sup>H NMR, and mass spectrometry, followed by the evaluation of their antimicrobial and antioxidant properties. <i>In vitro</i> screening against six bacterial strains (Staphylococcus aureus, Bacillus subtilis, Salmonella typhimurium, Escherichia coli, Pseudomonas aeruginosa, and Citrobacter freundii) and two fungal strains (Aspergillus niger and Trichoderma harzianum) revealed outstanding antibacterial activities, particularly with compound <b>5b</b>, <b>5d</b>, and <b>5e</b> against S. aureus, and compounds <b>5c</b> and <b>5h</b> against B. subtilis. Notably, compounds <b>5f</b> and <b>5g</b> exhibited significant effects against P. aeruginosa, while compound <b>5b</b> showed the highest antifungal activity against T. harzianum. All compounds demonstrated remarkable antioxidant activities, with <b>5h</b> (IC<sub>50</sub> values of 0.005 μM) and <b>5c</b> (IC<sub>50</sub> values of 0.006 μM) being the most potent, comparable to ascorbic acid (IC<sub>50</sub> values of 0.007 μM). <i>In silico</i> evaluations confirmed favorable drug-likeness and pharmacokinetic properties for all analogues, adhering to both Lipinski’s rule of Five and Veber’s rule. Molecular docking studies of potent antibacterial compounds (<b>5e</b> and <b>5h</b>) indicated strong binding affinities to the PBP-1b receptor in S. aureus, while DFT calculations provided valuable insights into their molecular reactivity and biological properties. Ligand-based enzymatic target predictions indicate that chalcone analogues (<b>5a–m</b>) show potential as inhibitors of oxidoreductases, kinases, enzymes, proteases, or ligands for family A GPCR. These findings position chalcone derivatives as promising candidates for therapeutic applications in combating bacterial infections and oxidative stress.

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Synthesis and biological activity
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