Label-free scattering snapshot classification for living cell identification

\nA scattering snapshot hold an enormous potential for cell class and state classification, allowing to avoid costly fluorescence labelling. Beside convolutional neural networks show outstanding image classification performance compared to other state-of-the-art methods, regarding accuracy and speed. Therefore, we combined the two techniques (Light Scattering and Deep Learning) to identify living cells with high precision. Neural Networks show high prediction performance for known classes but struggles when unknown classes need to be identified. In such a scenario no prior knowledge of the unknown cell class can be used for the model training, which inevitably results in a misclassification. To overcome the hurdle, of identifying unknown cell classes, we must first define an in-distribution of known snapshots to afterwards detect out of distribution snapshots as unknowns. Ones, such a new cell class is identified, we can retrain our cell classifier with the obtained knowledge, so we dynamically update the cell class database. We applied this measurement approach to scattering pattern snapshots of different classes of living cells. Our outcome shows a precise cell classification, which can be applied to a wide range of single cell classification approaches.\n

Publication Details

Journal
Springer Link (Chiba Institute of Technology)
Published
2024-10-31
DOI
https://doi.org/10.1051/epjconf/202430910021/pdf
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
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article

Label-free scattering snapshot classification for living cell identification

Springer Link (Chiba Institute of Technology)
Cell Image Analysis Techniques
article

Label-free scattering snapshot classification for living cell identification

article en

Abstract

\nA scattering snapshot hold an enormous potential for cell class and state classification, allowing to avoid costly fluorescence labelling. Beside convolutional neural networks show outstanding image classification performance compared to other state-of-the-art methods, regarding accuracy and speed. Therefore, we combined the two techniques (Light Scattering and Deep Learning) to identify living cells with high precision. Neural Networks show high prediction performance for known classes but struggles when unknown classes need to be identified. In such a scenario no prior knowledge of the unknown cell class can be used for the model training, which inevitably results in a misclassification. To overcome the hurdle, of identifying unknown cell classes, we must first define an in-distribution of known snapshots to afterwards detect out of distribution snapshots as unknowns. Ones, such a new cell class is identified, we can retrain our cell classifier with the obtained knowledge, so we dynamically update the cell class database. We applied this measurement approach to scattering pattern snapshots of different classes of living cells. Our outcome shows a precise cell classification, which can be applied to a wide range of single cell classification approaches.\n

Springer Link (Chiba Institute of Technology)
Openalex Percentile: Top 79%
Cell Image Analysis Techniques
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Label-free scattering snapshot classification for living cell identification · Springer Link (Chiba Institute of Technology) (2024) | TGRS Research Map | TGRS