Expanding\nthe Chemical Space of Reverse Fosmidomycin\nAnalogs

Multidrug-resistant pathogens pose a major threat to\nhuman health,\nnecessitating the identification of new drug targets and lead compounds\nthat are not susceptible to cross-resistance. This study demonstrates\nthat novel reverse thia analogs of the phosphonohydroxamic acid antibiotic\nfosmidomycin inhibit 1-deoxy-d-xylulose 5-phosphate reductoisomerase\n(DXR), an essential enzyme for Plasmodium falciparum, Escherichia coli, and Mycobacterium tuberculosis that is absent in humans.\nSome novel analogs with large α-phenyl substituents exhibited\nstrong inhibition across these three DXR orthologues, surpassing the\ninhibitory activity of fosmidomycin. Despite nanomolar target inhibition,\nthe new DXR inhibitors demonstrated mainly weak or no <i>in vitro</i> growth inhibition of the pathogens. Crystallographic studies revealed\nthat compounds <b>12a</b> and <b>12b</b> induce an open <i>Pf</i>DXR conformation and that the enzyme selectively binds\nthe <i>S</i>-enantiomers. The study underscores the difficulties\nof achieving potent cellular activity despite strong DXR inhibition\nand emphasizes the need for novel structural optimization strategies\nand comprehensive pharmacokinetic studies.

Publication Details

Journal
Figshare
Published
2024-12-23
DOI
https://doi.org/10.1021/acsmedchemlett.4c00501.s001
Primary Topic
Plant biochemistry and biosynthesis
Type
article
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article

Expanding\nthe Chemical Space of Reverse Fosmidomycin\nAnalogs

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Plant biochemistry and biosynthesis
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Expanding\nthe Chemical Space of Reverse Fosmidomycin\nAnalogs

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Abstract

Multidrug-resistant pathogens pose a major threat to\nhuman health,\nnecessitating the identification of new drug targets and lead compounds\nthat are not susceptible to cross-resistance. This study demonstrates\nthat novel reverse thia analogs of the phosphonohydroxamic acid antibiotic\nfosmidomycin inhibit 1-deoxy-d-xylulose 5-phosphate reductoisomerase\n(DXR), an essential enzyme for Plasmodium falciparum, Escherichia coli, and Mycobacterium tuberculosis that is absent in humans.\nSome novel analogs with large α-phenyl substituents exhibited\nstrong inhibition across these three DXR orthologues, surpassing the\ninhibitory activity of fosmidomycin. Despite nanomolar target inhibition,\nthe new DXR inhibitors demonstrated mainly weak or no <i>in vitro</i> growth inhibition of the pathogens. Crystallographic studies revealed\nthat compounds <b>12a</b> and <b>12b</b> induce an open <i>Pf</i>DXR conformation and that the enzyme selectively binds\nthe <i>S</i>-enantiomers. The study underscores the difficulties\nof achieving potent cellular activity despite strong DXR inhibition\nand emphasizes the need for novel structural optimization strategies\nand comprehensive pharmacokinetic studies.

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Plant biochemistry and biosynthesis
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Expanding\nthe Chemical Space of Reverse Fosmidomycin\nAnalogs · Figshare (2024) | TGRS Research Map | TGRS