Developmentof Potent and Selective CK1α MolecularGlue Degraders

Molecular glue degraders (MGDs) are small molecules that facilitate proximity between a target protein and an E3 ubiquitin ligase, thereby inducing target protein degradation. Glutarimide-containing compounds are MGDs that bind cereblon (CRBN) and recruit neosubstrates. Through explorative synthesis of a glutarimide-based library, we discovered a series of molecules that induce casein kinase 1 alpha (CK1α) degradation. By scaffold hopping and rational modification of the chemical scaffold, we identified an imidazo[1,2-<i>a</i>]pyrimidine compound that induces potent and selective CK1α degradation. A structure–activity relationship study of the lead compound, <b>QXG-6442</b>, identified the chemical features that contribute to degradation potency and selectivity compared to other frequently observed neosubstrates. The glutarimide library screening and structure–activity relationship medicinal chemistry approach we employed is generally useful for developing new molecular glue degraders toward new targets of interest.

Publication Details

Journal
Figshare
Published
2025-01-28
DOI
https://doi.org/10.1021/acs.jmedchem.4c02415.s004
Primary Topic
Geological and Geochemical Analysis
Type
article
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article

Developmentof Potent and Selective CK1α MolecularGlue Degraders

Figshare
Geological and Geochemical Analysis
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Developmentof Potent and Selective CK1α MolecularGlue Degraders

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Abstract

Molecular glue degraders (MGDs) are small molecules that facilitate proximity between a target protein and an E3 ubiquitin ligase, thereby inducing target protein degradation. Glutarimide-containing compounds are MGDs that bind cereblon (CRBN) and recruit neosubstrates. Through explorative synthesis of a glutarimide-based library, we discovered a series of molecules that induce casein kinase 1 alpha (CK1α) degradation. By scaffold hopping and rational modification of the chemical scaffold, we identified an imidazo[1,2-<i>a</i>]pyrimidine compound that induces potent and selective CK1α degradation. A structure–activity relationship study of the lead compound, <b>QXG-6442</b>, identified the chemical features that contribute to degradation potency and selectivity compared to other frequently observed neosubstrates. The glutarimide library screening and structure–activity relationship medicinal chemistry approach we employed is generally useful for developing new molecular glue degraders toward new targets of interest.

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Geological and Geochemical Analysis
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