AA manuscript

Data related to AA manuscript Data to reproduce findings in the manuscript "Single-cell characterization of immune aplastic anemia reveals convergence of adaptive and innate immunity". The folder contains: 1) Processed scRNA+TCRαβ-seq data as Seurat-objects, including * "discovery" object with AA and healthy samples (Fig. 1) * "pan-heme" NK cell object with AA, healthy, and other hematological disorder samples (Fig. 2) * "pan-heme" CD8+ cell object with AA, healthy, and other hematological disorder samples (Fig. 2) * "pan-heme" CD4+ cell object with AA, healthy, and other hematological disorder samples (Fig. 2) * "co-culture" demultiplexed CD45+ object from all different co-culture conditions (Fig. 5&6) * "co-culture" HSPC object from all different co-culture conditions (Fig. 5) * "co-culture" NK cell object from all different co-culture conditions (Fig. 5) * "co-culture" CD8+ cell object from all different co-culture conditions (Fig. 6) 2) TCRβ-seq samples profiled in this study, including * AA * PNH * MDS * T-LGLL * IBMFS * ICUS/CHIP 3) scTCRαβ-seq data from AA BM samples 4) Olink cytokine data from AA and healthy samples Please see manuscript and Github for further details. Other accession codes are in the manuscript.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-12-31
DOI
https://doi.org/10.5281/zenodo.8170957
Primary Topic
Hematopoietic Stem Cell Transplantation
Type
article
Field-Weighted Citation Impact
0.00
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AA manuscript

Zenodo (CERN European Organization for Nuclear Research)
Hematopoietic Stem Cell Transplantation
article

AA manuscript

article en

Abstract

Data related to AA manuscript Data to reproduce findings in the manuscript "Single-cell characterization of immune aplastic anemia reveals convergence of adaptive and innate immunity". The folder contains: 1) Processed scRNA+TCRαβ-seq data as Seurat-objects, including * "discovery" object with AA and healthy samples (Fig. 1) * "pan-heme" NK cell object with AA, healthy, and other hematological disorder samples (Fig. 2) * "pan-heme" CD8+ cell object with AA, healthy, and other hematological disorder samples (Fig. 2) * "pan-heme" CD4+ cell object with AA, healthy, and other hematological disorder samples (Fig. 2) * "co-culture" demultiplexed CD45+ object from all different co-culture conditions (Fig. 5&6) * "co-culture" HSPC object from all different co-culture conditions (Fig. 5) * "co-culture" NK cell object from all different co-culture conditions (Fig. 5) * "co-culture" CD8+ cell object from all different co-culture conditions (Fig. 6) 2) TCRβ-seq samples profiled in this study, including * AA * PNH * MDS * T-LGLL * IBMFS * ICUS/CHIP 3) scTCRαβ-seq data from AA BM samples 4) Olink cytokine data from AA and healthy samples Please see manuscript and Github for further details. Other accession codes are in the manuscript.

Zenodo (CERN European Organization for Nuclear Research)
University of Helsinki (FI)
Openalex Percentile: Top 52%
Hematopoietic Stem Cell Transplantation
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AA manuscript · Zenodo (CERN European Organization for Nuclear Research) (2024) | TGRS Research Map | TGRS