Density-dependent inhibition and higher-order nteractions enable coexistence in phage-bacteria community dynamics

In this repository, all the ODE models, the Bayesian scripts, and figure figure-generating scripts can be found. The Bayesian analysis is performed using the DRAM-MCMC algorithm using the open-sourced mcmcstat package. The raw population dynamics data from pairwise experiments and community dynamics, and the analysed results, are packaged here. This repository accompanies the publication.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2025-11-04
DOI
https://doi.org/10.5281/zenodo.15314293
Primary Topic
Bacteriophages and microbial interactions
Type
article
Field-Weighted Citation Impact
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article

Density-dependent inhibition and higher-order nteractions enable coexistence in phage-bacteria community dynamics

Zenodo (CERN European Organization for Nuclear Research)
Bacteriophages and microbial interactions
article

Density-dependent inhibition and higher-order nteractions enable coexistence in phage-bacteria community dynamics

article en

Abstract

In this repository, all the ODE models, the Bayesian scripts, and figure figure-generating scripts can be found. The Bayesian analysis is performed using the DRAM-MCMC algorithm using the open-sourced mcmcstat package. The raw population dynamics data from pairwise experiments and community dynamics, and the analysed results, are packaged here. This repository accompanies the publication.

Zenodo (CERN European Organization for Nuclear Research)
Georgia Institute of Technology (US), University of Maryland, College Park (US)
Quality Education
Openalex Percentile: Top 58%
Bacteriophages and microbial interactions
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Density-dependent inhibition and higher-order nteractions enable coexistence in phage-bacteria community dynamics · Zenodo (CERN European Organization for Nuclear Research) (2025) | TGRS Research Map | TGRS