Dataset for PRAGA

Human Lymph Node dataset [1] and spatial epigenome–transcriptome mouse brain dataset [2] used in PRAGA: Prototype-aware Graph Adaptive Aggregation for Spatial Multi-modal Omics Analysis [1] Long, Y.; Ang, K. S.; Sethi, R.; Liao, S.; Heng, Y.; van Olst, L.; Ye, S.; Zhong, C.; Xu, H.; Zhang, D.; et al. 2024. Deciphering spatial domains from spatial multi-omics with SpatialGlue. Nature Methods, 1–10.[2] Liao, S.; Heng, Y.; Liu, W.; Xiang, J.; Ma, Y.; Chen, L.; Feng, X.; Jia, D.; Liang, D.; Huang, C.; et al. 2023. Integrated spatial transcriptomic and proteomic analysis of fresh frozen tissue based on stereo-seq. bioRxiv, 2023–04

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2024-12-13
DOI
https://doi.org/10.5281/zenodo.14439975
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00
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article

Dataset for PRAGA

Zenodo (CERN European Organization for Nuclear Research)
Single-cell and spatial transcriptomics
article

Dataset for PRAGA

article en

Abstract

Human Lymph Node dataset [1] and spatial epigenome–transcriptome mouse brain dataset [2] used in PRAGA: Prototype-aware Graph Adaptive Aggregation for Spatial Multi-modal Omics Analysis [1] Long, Y.; Ang, K. S.; Sethi, R.; Liao, S.; Heng, Y.; van Olst, L.; Ye, S.; Zhong, C.; Xu, H.; Zhang, D.; et al. 2024. Deciphering spatial domains from spatial multi-omics with SpatialGlue. Nature Methods, 1–10.[2] Liao, S.; Heng, Y.; Liu, W.; Xiang, J.; Ma, Y.; Chen, L.; Feng, X.; Jia, D.; Liang, D.; Huang, C.; et al. 2023. Integrated spatial transcriptomic and proteomic analysis of fresh frozen tissue based on stereo-seq. bioRxiv, 2023–04

Zenodo (CERN European Organization for Nuclear Research)
Zero hunger
Openalex Percentile: Top 75%
Single-cell and spatial transcriptomics
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Dataset for PRAGA · Zenodo (CERN European Organization for Nuclear Research) (2024) | TGRS Research Map | TGRS