Odds of observing an iKIR modification across <i>DQA1*01</i>:<i>02</i>, <i>DQB1*03</i>:<i>01</i>, <i>DQA1*02</i>:<i>01</i> and <i>DQA1*01</i>:<i>02-DQB1*06</

<p>The iKIR effect observed in the case-control cohort was validated in an independent family dataset. Trios were stratified into high (<b>></b>threshold) and low (<b>≤</b> threshold) iKIR score according to the iKIR score of the child in each trio. For each threshold and each genotype, we calculated the ratio of transmitted to non-transmitted genes in each stratum. The odds of observing an equal or greater difference between log ratios across 4 frequent protective genotypes (<i>DQA1*01</i>:<i>02</i>, <i>DQB1*03</i>:<i>01</i>, <i>DQA1*02</i>:<i>01</i> and <i>DQA1*01</i>:<i>02-DQB1*06</i>:<i>02</i>) were assessed by permutation test.</p> <p>(PDF)</p>

Publication Details

Journal
Figshare
Published
2024-12-26
DOI
https://doi.org/10.1371/journal.pgen.1011456.s024
Primary Topic
NF-κB Signaling Pathways
Type
article
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article

Odds of observing an iKIR modification across DQA1*01:02, DQB1*03:01, DQA1*02:01 and DQA1*01:02-DQB1*06</

Figshare
NF-κB Signaling Pathways
article

Odds of observing an iKIR modification across DQA1*01:02, DQB1*03:01, DQA1*02:01 and DQA1*01:02-DQB1*06</

article en

Abstract

&lt;p&gt;The iKIR effect observed in the case-control cohort was validated in an independent family dataset. Trios were stratified into high (&lt;b&gt;&gt;&lt;/b&gt;threshold) and low (&lt;b&gt;≤&lt;/b&gt; threshold) iKIR score according to the iKIR score of the child in each trio. For each threshold and each genotype, we calculated the ratio of transmitted to non-transmitted genes in each stratum. The odds of observing an equal or greater difference between log ratios across 4 frequent protective genotypes (&lt;i&gt;DQA1*01&lt;/i&gt;:&lt;i&gt;02&lt;/i&gt;, &lt;i&gt;DQB1*03&lt;/i&gt;:&lt;i&gt;01&lt;/i&gt;, &lt;i&gt;DQA1*02&lt;/i&gt;:&lt;i&gt;01&lt;/i&gt; and &lt;i&gt;DQA1*01&lt;/i&gt;:&lt;i&gt;02-DQB1*06&lt;/i&gt;:&lt;i&gt;02&lt;/i&gt;) were assessed by permutation test.&lt;/p&gt; &lt;p&gt;(PDF)&lt;/p&gt;

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Openalex Percentile: Top 64%
NF-κB Signaling Pathways
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