Identifying functionally important sites in natural protein families: Mean performance over phylogenetic cutoffs.

<p>Same as in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012091#pcbi.1012091.g006" target="_blank">Fig 6</a>, but using the mean of the performance, i.e. mean of the symmetrized AUCs, over all phylogenetic cutoffs considered. The error bars represent the standard deviation over phylogenetic cutoffs. Here, the average of the symmetrized AUC over all families is 0.42 for conservation, 0.39 for ICOD, 0.25 for MI and 0.19 for SCA. The mapping between protein family number and name is given in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012091#pcbi.1012091.s015" target="_blank">S1 Table</a>.</p> <p>(PDF)</p>

Publication Details

Journal
Figshare
Published
2024-09-23
DOI
https://doi.org/10.1371/journal.pcbi.1012091.s009
Primary Topic
Genomics and Phylogenetic Studies
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article
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0.00
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article

Identifying functionally important sites in natural protein families: Mean performance over phylogenetic cutoffs.

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Genomics and Phylogenetic Studies
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Identifying functionally important sites in natural protein families: Mean performance over phylogenetic cutoffs.

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Abstract

<p>Same as in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012091#pcbi.1012091.g006" target="_blank">Fig 6</a>, but using the mean of the performance, i.e. mean of the symmetrized AUCs, over all phylogenetic cutoffs considered. The error bars represent the standard deviation over phylogenetic cutoffs. Here, the average of the symmetrized AUC over all families is 0.42 for conservation, 0.39 for ICOD, 0.25 for MI and 0.19 for SCA. The mapping between protein family number and name is given in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012091#pcbi.1012091.s015" target="_blank">S1 Table</a>.</p> <p>(PDF)</p>

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Identifying functionally important sites in natural protein families: Mean performance over phylogenetic cutoffs. · Figshare (2024) | TGRS Research Map | TGRS