Impact of FluorinePattern on Lipophilicity and Acid–BaseProperties of 2‑(Thiofluoroalkyl)pyridines: Insights from Experimentsand Statistical Modeling

Lipophilicity and acid–base properties are two key aspects of the optimization of a compound in drug discovery. Using <sup>19</sup>F NMR, we experimentally determined the log <i>D</i><sup>7.4</sup> of a wide array of 2-thiofluoroalkyl (SR<sub>F</sub>) and 2-sulfonyl fluoroalkyl (SO<sub>2</sub>R<sub>F</sub>) substituted pyridines and the p<i>K</i><sub>a</sub> values of their protonated counterparts. Statistical modeling based on constitutional and DFT descriptors provided further insights into the structure–property relationship, explaining the experimental observations and predicting log <i>D</i><sup>7.4</sup> values. Our results highlight the influence of fluorination topology in SR<sub>F</sub> fragments and demonstrate the dual effect of fluorine on molecular polarity, increasing the hydrophobic surface and the polarity of the sulfur moiety. By analyzing methyl- and ethyl-derived fragments, we found a gradient in log <i>D</i><sup>7.4</sup> values influenced by the oxidation state of the sulfur atom and fluorination pattern. Our findings emphasize the context-dependent impact of fluorination and offer insights to better understand the impact of thiofluoroalkyl chains on these physicochemical properties.

Publication Details

Journal
Figshare
Published
2025-02-17
DOI
https://doi.org/10.1021/acs.jmedchem.4c03045.s001
Primary Topic
Molecular spectroscopy and chirality
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article
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article

Impact of FluorinePattern on Lipophilicity and Acid–BaseProperties of 2‑(Thiofluoroalkyl)pyridines: Insights from Experimentsand Statistical Modeling

Figshare
Molecular spectroscopy and chirality
article

Impact of FluorinePattern on Lipophilicity and Acid–BaseProperties of 2‑(Thiofluoroalkyl)pyridines: Insights from Experimentsand Statistical Modeling

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Abstract

Lipophilicity and acid–base properties are two key aspects of the optimization of a compound in drug discovery. Using <sup>19</sup>F NMR, we experimentally determined the log <i>D</i><sup>7.4</sup> of a wide array of 2-thiofluoroalkyl (SR<sub>F</sub>) and 2-sulfonyl fluoroalkyl (SO<sub>2</sub>R<sub>F</sub>) substituted pyridines and the p<i>K</i><sub>a</sub> values of their protonated counterparts. Statistical modeling based on constitutional and DFT descriptors provided further insights into the structure–property relationship, explaining the experimental observations and predicting log <i>D</i><sup>7.4</sup> values. Our results highlight the influence of fluorination topology in SR<sub>F</sub> fragments and demonstrate the dual effect of fluorine on molecular polarity, increasing the hydrophobic surface and the polarity of the sulfur moiety. By analyzing methyl- and ethyl-derived fragments, we found a gradient in log <i>D</i><sup>7.4</sup> values influenced by the oxidation state of the sulfur atom and fluorination pattern. Our findings emphasize the context-dependent impact of fluorination and offer insights to better understand the impact of thiofluoroalkyl chains on these physicochemical properties.

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