The correct use of the term isobar for molecules

Abstract In analytical chemistry literature, the term isobar is frequently used to describe small molecules with identical molecular formulas, often interchangeably used with isomer. This usage conflicts with the historical and International Union of Pure and Applied Chemistry (IUPAC) definition of isobar, which refers to nuclides of different elements with equal mass numbers but different proton-to-neutron ratios. In small-molecule LC-MS/MS analysis, this terminological overlap leads to confusion, particularly when distinguishing between compounds with identical exact masses (isomers) and those with different elemental compositions but nearly identical masses (molecular isobars). This article explores the origin and definitions of both terms and provides examples highlighting that the term isobar can be used for molecules but not for isomers, thereby emphasizing the importance of precise nomenclature for accurate molecular identification and interpretation in mass spectrometry.

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Publication Details

Journal
Pure and Applied Chemistry
Published
2025-12-20
DOI
https://doi.org/10.1515/pac-2025-0618
Primary Topic
Mass Spectrometry Techniques and Applications
Type
article
Field-Weighted Citation Impact
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article

The correct use of the term isobar for molecules

Alwin D. R. Huitema, Kim C. M. van der Elst, Arjen M. Punt, Ruben E.A. Musson
Pure and Applied Chemistry
Mass Spectrometry Techniques and Applications
article

The correct use of the term isobar for molecules

Alwin D. R. Huitema, Kim C. M. van der Elst, Arjen M. Punt, Ruben E.A. Musson
article en

Abstract

Abstract In analytical chemistry literature, the term isobar is frequently used to describe small molecules with identical molecular formulas, often interchangeably used with isomer. This usage conflicts with the historical and International Union of Pure and Applied Chemistry (IUPAC) definition of isobar, which refers to nuclides of different elements with equal mass numbers but different proton-to-neutron ratios. In small-molecule LC-MS/MS analysis, this terminological overlap leads to confusion, particularly when distinguishing between compounds with identical exact masses (isomers) and those with different elemental compositions but nearly identical masses (molecular isobars). This article explores the origin and definitions of both terms and provides examples highlighting that the term isobar can be used for molecules but not for isomers, thereby emphasizing the importance of precise nomenclature for accurate molecular identification and interpretation in mass spectrometry.

Pure and Applied Chemistry
Utrecht University (NL), University Medical Center Utrecht (NL), Oncode Institute (NL), Princess Máxima Center (NL)
Openalex Percentile: Top 63%
Mass Spectrometry Techniques and Applications
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The correct use of the term isobar for molecules — Alwin D. R. Huitema, Kim C. M. van der Elst, et al. · Pure and Applied Chemistry (2025) | TGRS Research Map | TGRS