Nano-Sieve–Enabled On-Chip Concentration and Multiplexed Detection of Raman-Dye–Labeled Nanocubes

To address persistent challenges in molecular detection-particularly signal variability, low analyte abundance, and poor spectral reproducibility-a portable bead-stacked nano-sieve platform was engineered to enable robust on-chip Raman signal amplification using silver nanocubes (AgNCs) functionalized with Raman-active thiolated ligands. The microdevice integrates deformable elastomeric channels with magnetic bead stacking to immobilize and concentrate AgNCs within confined nanoscopic junctions, thereby generating densely packed plasmonic hot-spot architectures that markedly enhance Surface-Enhanced Raman Scattering (SERS) efficiency. Time-resolved measurements revealed substantial increases in Raman intensity for both 4-mercaptobenzoic acid (4-MBA) and 4-aminothiophenol (4-ATP), outperforming corresponding off-chip assays and maintaining stable enhancement factors over a four-hour operational window. Furthermore, the platform successfully demonstrated multiplexed sensing capability: mixed-analyte experiments containing 4-MBA, 4-ATP, and cysteamine produced clearly distinguishable spectral fingerprints, even under serial dilution and dynamically pulsed sample delivery. Collectively, these results establish the bead-stacked nano-sieve as a versatile, label-free, and scalable diagnostic architecture capable of achieving high sensitivity and spectral fidelity under continuous-flow conditions. Our technology holds significant promise for real-time, non-invasive molecular surveillance, point-of-care diagnostics, and early disease monitoring in resource-limited or field-deployable settings.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2025-12-19
DOI
https://doi.org/10.64898/2025.12.17.695009
Primary Topic
Gold and Silver Nanoparticles Synthesis and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Nano-Sieve–Enabled On-Chip Concentration and Multiplexed Detection of Raman-Dye–Labeled Nanocubes

Ruoxue Yan, Huiyuan Guo, Xinye Chen, Ke Du et al.
bioRxiv (Cold Spring Harbor Laboratory)
Gold and Silver Nanoparticles Synthesis and Applications
article

Nano-Sieve–Enabled On-Chip Concentration and Multiplexed Detection of Raman-Dye–Labeled Nanocubes

Ruoxue Yan, Huiyuan Guo, Xinye Chen, Ke Du, Eun Bok, Ting Hui Ng, Zhaoxi Yang, Yoon Jung, Kyoung-Jin Yoon, K. Q. Lao
article en

Abstract

To address persistent challenges in molecular detection-particularly signal variability, low analyte abundance, and poor spectral reproducibility-a portable bead-stacked nano-sieve platform was engineered to enable robust on-chip Raman signal amplification using silver nanocubes (AgNCs) functionalized with Raman-active thiolated ligands. The microdevice integrates deformable elastomeric channels with magnetic bead stacking to immobilize and concentrate AgNCs within confined nanoscopic junctions, thereby generating densely packed plasmonic hot-spot architectures that markedly enhance Surface-Enhanced Raman Scattering (SERS) efficiency. Time-resolved measurements revealed substantial increases in Raman intensity for both 4-mercaptobenzoic acid (4-MBA) and 4-aminothiophenol (4-ATP), outperforming corresponding off-chip assays and maintaining stable enhancement factors over a four-hour operational window. Furthermore, the platform successfully demonstrated multiplexed sensing capability: mixed-analyte experiments containing 4-MBA, 4-ATP, and cysteamine produced clearly distinguishable spectral fingerprints, even under serial dilution and dynamically pulsed sample delivery. Collectively, these results establish the bead-stacked nano-sieve as a versatile, label-free, and scalable diagnostic architecture capable of achieving high sensitivity and spectral fidelity under continuous-flow conditions. Our technology holds significant promise for real-time, non-invasive molecular surveillance, point-of-care diagnostics, and early disease monitoring in resource-limited or field-deployable settings.

bioRxiv (Cold Spring Harbor Laboratory)
University of California, Riverside (US), Binghamton University (US), Iowa State University (US), National Institute of Animal Science (KR)
U.S. Department of Agriculture, Rural Development Administration, National Institute of Food and Agriculture
Openalex Percentile: Top 69%
Gold and Silver Nanoparticles Synthesis and Applications
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