Standardized SDS-PAGE Workflow for Personalized Protein Corona Profiling in Early Cancer Detection

The formation of a personalized protein corona (PC) on nanoparticles (NPs) upon exposure to biological fluids has emerged as a promising, minimally invasive strategy for early cancer detection. This study introduces a standardized protocol for profiling the protein corona using sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), optimized to ensure robustness, reproducibility, and automation. The method was rigorously validated across a variety of nanoparticle (NP) platforms, plasma sources, and experimental conditions, demonstrating consistently reproducible profiles with minimal operator-dependent variability. In comparison to conventional proteomics techniques, this approach offers a faster, more cost-effective solution that meets the World Health Organization's REASSURED criteria for diagnostics. When applied to pancreatic ductal adenocarcinoma (PDAC), a highly aggressive malignancy with limited early biomarkers, this workflow achieved classification accuracies of up to 90%, even in early-stage patients. This standardized platform marks a significant advancement towards scalable, clinically translatable, and affordable diagnostic tools for cancer screening.

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Publication Details

Journal
Journal of Visualized Experiments
Published
2025-12-19
DOI
https://doi.org/10.3791/69090
Primary Topic
Advanced Proteomics Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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Standardized SDS-PAGE Workflow for Personalized Protein Corona Profiling in Early Cancer Detection

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Journal of Visualized Experiments
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Standardized SDS-PAGE Workflow for Personalized Protein Corona Profiling in Early Cancer Detection

Francesca Giulimondi, Daniela Pozzi, Giulio Caracciolo, Serena Renzi, Erica Quagliarini, Luca Digiacomo, Manuela Iacobini
article en

Abstract

The formation of a personalized protein corona (PC) on nanoparticles (NPs) upon exposure to biological fluids has emerged as a promising, minimally invasive strategy for early cancer detection. This study introduces a standardized protocol for profiling the protein corona using sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), optimized to ensure robustness, reproducibility, and automation. The method was rigorously validated across a variety of nanoparticle (NP) platforms, plasma sources, and experimental conditions, demonstrating consistently reproducible profiles with minimal operator-dependent variability. In comparison to conventional proteomics techniques, this approach offers a faster, more cost-effective solution that meets the World Health Organization's REASSURED criteria for diagnostics. When applied to pancreatic ductal adenocarcinoma (PDAC), a highly aggressive malignancy with limited early biomarkers, this workflow achieved classification accuracies of up to 90%, even in early-stage patients. This standardized platform marks a significant advancement towards scalable, clinically translatable, and affordable diagnostic tools for cancer screening.

Journal of Visualized Experiments(226)
University of Cagliari (IT), Sapienza University of Rome (IT)
Openalex Percentile: Top 63%
Advanced Proteomics Techniques and Applications
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