Emergent eukaryotic directional sensing via receptor degradation and diffusion

Directional sensing enables eukaryotic cells to detect spatial gradients of extracellular ligands, allowing them to orient and migrate within complex environments. Prevalent models explain this computation through a circuit where signaling species with distinct diffusion constants act incoherently on a downstream readout. Here, we propose a fundamentally different mechanism of directional sensing based on simple receptor-level processes. Our model integrates three ubiquitous receptor processes-lateral diffusion, basal ligand-independent activation, and active receptor degradation, THAT together synergize to generate robust directional sensing. In the absence of diffusion, active receptor degradation and basal activity implement an integral feedback that adapts active receptor levels to a ligand-independent set point while depleting receptors in relatively ligand-rich regions. Diffusion then redistributes receptors from regions of relatively low ligand exposure to regions with higher ligand exposure. This creates a spatial mismatch between activity and feedback that drives asymmetric receptor activity relative to the set point. The model predicts an optimal diffusion constant that maximizes polarization, reveals that receptors can encode relative rather than absolute ligand concentrations, and identifies the optimal basal activity that maximizes the signal-to-noise ratio in stochastic regimes. A survey of kinetic parameters across receptor families suggests that this diffusion-degradation synergy constitutes a broadly applicable, receptor-level mechanism for directional sensing.

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Publication Details

Journal
Proceedings of the National Academy of Sciences
Published
2025-12-18
DOI
https://doi.org/10.1073/pnas.2516077122
Primary Topic
Gene Regulatory Network Analysis
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article
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article

Emergent eukaryotic directional sensing via receptor degradation and diffusion

Purushottam D. Dixit, Andrew Goetz
Proceedings of the National Academy of Sciences
Gene Regulatory Network Analysis
article

Emergent eukaryotic directional sensing via receptor degradation and diffusion

Purushottam D. Dixit, Andrew Goetz
article en

Abstract

Directional sensing enables eukaryotic cells to detect spatial gradients of extracellular ligands, allowing them to orient and migrate within complex environments. Prevalent models explain this computation through a circuit where signaling species with distinct diffusion constants act incoherently on a downstream readout. Here, we propose a fundamentally different mechanism of directional sensing based on simple receptor-level processes. Our model integrates three ubiquitous receptor processes-lateral diffusion, basal ligand-independent activation, and active receptor degradation, THAT together synergize to generate robust directional sensing. In the absence of diffusion, active receptor degradation and basal activity implement an integral feedback that adapts active receptor levels to a ligand-independent set point while depleting receptors in relatively ligand-rich regions. Diffusion then redistributes receptors from regions of relatively low ligand exposure to regions with higher ligand exposure. This creates a spatial mismatch between activity and feedback that drives asymmetric receptor activity relative to the set point. The model predicts an optimal diffusion constant that maximizes polarization, reveals that receptors can encode relative rather than absolute ligand concentrations, and identifies the optimal basal activity that maximizes the signal-to-noise ratio in stochastic regimes. A survey of kinetic parameters across receptor families suggests that this diffusion-degradation synergy constitutes a broadly applicable, receptor-level mechanism for directional sensing.

Proceedings of the National Academy of SciencesVol. 122(51)
Yale University (US), Systems Biology Institute (JP), Division of Undergraduate Education (US)
Openalex Percentile: Top 63%
Gene Regulatory Network Analysis
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Emergent eukaryotic directional sensing via receptor degradation and diffusion — Purushottam D. Dixit, Andrew Goetz · Proceedings of the National Academy of Sciences (2025) | TGRS Research Map | TGRS