Pyrimidine Based Inhibitors Targeting Glutathione S‐Transferase in Phase II Detoxification: Antioxidant, ADMET, Docking, and Molecular Dynamics Evaluation

The present study has been conducted to investigate the inhibitory effects and antioxidant capacities of two pyrimidine derivatives, 4,6-Dichloro-2-(methylthio) pyrimidine-5-carbonyl chloride (p1) and 4,6-Dichloro-2-(methylthio) pyrimidine-5-carboxyamide (p2), against the glutathione S-transferase (GST) enzyme for exploring their potential as therapeutic agents in conditions related to oxidative stress and drug resistance mediated through GST. The data are compared with that of ethacrynic acid (EA), a well-documented GST inhibitor. The IC<sub>50</sub> values for molecules p1, p2, and EA were computed to be 38.5 nM, 46.2 nM, and 5.82 nM, respectively. During the second part of the inhibition study, Ki values calculated from IC<sub>50</sub> plots became 57.61 nM for molecule p1, 43.75 nM for molecule p2, and 4.43 nM for EA. Molecules p1 and p2 depicted non-competitive mechanisms, while EA followed competitive inhibition. Moreover, antioxidant capacities of molecules were tested by the 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging assay method. Using the DPPH method scavenging activity in both p1 and p2 was comparable to that of the reference standard, ascorbic acid (AA). Other than this, biological activities of GST enzyme complexes were further validated using molecular docking, molecular dynamics, and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) analyses. These complementary studies gave further insight into binding affinities, dynamic stability, and pharmacokinetic properties, reinforcing the impact of p1 and p2 complexation on GST structural and functional characteristics.

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Journal
Journal of Biochemical and Molecular Toxicology
Published
2025-12-01
DOI
https://doi.org/10.1002/jbt.70652
Primary Topic
Glutathione Transferases and Polymorphisms
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article
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article

Pyrimidine Based Inhibitors Targeting Glutathione S‐Transferase in Phase II Detoxification: Antioxidant, ADMET, Docking, and Molecular Dynamics Evaluation

Fikret Türkan, Adnan Çetin, Meryem Ayan Ustun
Journal of Biochemical and Molecular Toxicology
Glutathione Transferases and Polymorphisms
article

Pyrimidine Based Inhibitors Targeting Glutathione S‐Transferase in Phase II Detoxification: Antioxidant, ADMET, Docking, and Molecular Dynamics Evaluation

Fikret Türkan, Adnan Çetin, Meryem Ayan Ustun
article en

Abstract

The present study has been conducted to investigate the inhibitory effects and antioxidant capacities of two pyrimidine derivatives, 4,6-Dichloro-2-(methylthio) pyrimidine-5-carbonyl chloride (p1) and 4,6-Dichloro-2-(methylthio) pyrimidine-5-carboxyamide (p2), against the glutathione S-transferase (GST) enzyme for exploring their potential as therapeutic agents in conditions related to oxidative stress and drug resistance mediated through GST. The data are compared with that of ethacrynic acid (EA), a well-documented GST inhibitor. The IC<sub>50</sub> values for molecules p1, p2, and EA were computed to be 38.5 nM, 46.2 nM, and 5.82 nM, respectively. During the second part of the inhibition study, Ki values calculated from IC<sub>50</sub> plots became 57.61 nM for molecule p1, 43.75 nM for molecule p2, and 4.43 nM for EA. Molecules p1 and p2 depicted non-competitive mechanisms, while EA followed competitive inhibition. Moreover, antioxidant capacities of molecules were tested by the 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging assay method. Using the DPPH method scavenging activity in both p1 and p2 was comparable to that of the reference standard, ascorbic acid (AA). Other than this, biological activities of GST enzyme complexes were further validated using molecular docking, molecular dynamics, and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) analyses. These complementary studies gave further insight into binding affinities, dynamic stability, and pharmacokinetic properties, reinforcing the impact of p1 and p2 complexation on GST structural and functional characteristics.

Journal of Biochemical and Molecular ToxicologyVol. 39(12)
Van Yüzüncü Yıl Üniversitesi (TR), Iğdır Üniversitesi (TR), Nakhchivan State University (AZ)
Openalex Percentile: Top 63%
Glutathione Transferases and Polymorphisms
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Pyrimidine Based Inhibitors Targeting Glutathione S‐Transferase in Phase II Detoxification: Antioxidant, ADMET, Docking, and Molecular Dynamics Evaluation — Fikret Türkan, Adnan Çetin, et al. · Journal of Biochemical and Molecular Toxicology (2025) | TGRS Research Map | TGRS