Time-Aware Attention for Enhanced Electronic Health Records Modeling

Electronic Health Records (EHR) contain valuable clinical information for predicting patient outcomes and guiding healthcare decisions. However, effectively modeling Electronic Health Records (EHRs) requires addressing data heterogeneity and complex temporal patterns. Standard approaches often struggle with irregular time intervals between clinical events. We propose TALE-EHR, a Transformer-based framework featuring a novel time-aware attention mechanism that explicitly models continuous temporal gaps to capture fine-grained sequence dynamics. To complement this temporal modeling with robust semantics, TALE-EHR leverages embeddings derived from standardized code descriptions using a pre-trained Large Language Model (LLM), providing a strong foundation for understanding clinical concepts. Experiments on the MIMIC-IV and PIC dataset demonstrate that our approach outperforms state-of-the-art baselines on tasks such as disease progression forecasting. TALE-EHR underscores the benefit of integrating explicit, continuous temporal modeling with strong semantic representations provides a powerful solution for advancing EHR analysis.

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Publication Details

Journal
ArXiv.org
Published
2025-07-20
Primary Topic
Machine Learning in Healthcare
Type
article
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article

Time-Aware Attention for Enhanced Electronic Health Records Modeling

Doudou Zhou, Junwei Lu, Tianxi Cai, Jianxing Yu et al.
ArXiv.org
Machine Learning in Healthcare
article

Time-Aware Attention for Enhanced Electronic Health Records Modeling

Doudou Zhou, Junwei Lu, Tianxi Cai, Jianxing Yu, Zhunyi Feng
article en

Abstract

Electronic Health Records (EHR) contain valuable clinical information for predicting patient outcomes and guiding healthcare decisions. However, effectively modeling Electronic Health Records (EHRs) requires addressing data heterogeneity and complex temporal patterns. Standard approaches often struggle with irregular time intervals between clinical events. We propose TALE-EHR, a Transformer-based framework featuring a novel time-aware attention mechanism that explicitly models continuous temporal gaps to capture fine-grained sequence dynamics. To complement this temporal modeling with robust semantics, TALE-EHR leverages embeddings derived from standardized code descriptions using a pre-trained Large Language Model (LLM), providing a strong foundation for understanding clinical concepts. Experiments on the MIMIC-IV and PIC dataset demonstrate that our approach outperforms state-of-the-art baselines on tasks such as disease progression forecasting. TALE-EHR underscores the benefit of integrating explicit, continuous temporal modeling with strong semantic representations provides a powerful solution for advancing EHR analysis.

ArXiv.org
Openalex Percentile: Top 78%
Machine Learning in Healthcare
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Time-Aware Attention for Enhanced Electronic Health Records Modeling — Doudou Zhou, Junwei Lu, et al. · ArXiv.org (2025) | TGRS Research Map | TGRS