CQPES: A GPU-Aided Software Package for Developing Full-Dimensional Accurate Potential Energy Surfaces by Permutation-Invariant-Polynomial Neural Network

Accurate potential energy surfaces (PESs) are the prerequisite for precise studies of molecular dynamics and spectroscopy. The permutationally invariant polynomial neural network (PIP-NN) method has proven highly successful in constructing full-dimensional PESs for gas-phase molecular systems. Building upon over a decade of development, we present CQPES v1.0 (ChongQing Potential Energy Surface), an open-source software package designed to automate and accelerate PES construction. CQPES integrates data preparation, PIP basis generation, and model training into a modernized Python-based workflow, while retaining high-efficiency Fortran kernels for processing dynamics interfaces. Key features include GPU-accelerated training via TensorFlow, the robust Levenberg–Marquardt optimizer for high-precision fitting, real time monitoring via Jupyter and Tensorboard, and an active learning module that is built on top of these. We demonstrate the capabilities of CQPES through four representative case studies: CH4 to benchmark high-symmetry handling, CH3CN for a typical unimolecular isomerization reaction, OH + CH3OH to test GPU training acceleration on a large system, and Ar + H2O to validate the active learning module. Furthermore, CQPES provides direct interfaces with established dynamics software such as Gaussian 16, Polyrate 2017-C, VENUS96C, RPMDRate v2.0, and Caracal v1.1, enabling immediate application in chemical kinetics and dynamics simulations.

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Publication Details

Journal
Chemistry
Published
2025-12-17
DOI
https://doi.org/10.3390/chemistry7060201
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00

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article

CQPES: A GPU-Aided Software Package for Developing Full-Dimensional Accurate Potential Energy Surfaces by Permutation-Invariant-Polynomial Neural Network

Jun Li, K. Song, Junhong Li
Chemistry
Machine Learning in Materials Science
article

CQPES: A GPU-Aided Software Package for Developing Full-Dimensional Accurate Potential Energy Surfaces by Permutation-Invariant-Polynomial Neural Network

Jun Li, K. Song, Junhong Li
article en

Abstract

Accurate potential energy surfaces (PESs) are the prerequisite for precise studies of molecular dynamics and spectroscopy. The permutationally invariant polynomial neural network (PIP-NN) method has proven highly successful in constructing full-dimensional PESs for gas-phase molecular systems. Building upon over a decade of development, we present CQPES v1.0 (ChongQing Potential Energy Surface), an open-source software package designed to automate and accelerate PES construction. CQPES integrates data preparation, PIP basis generation, and model training into a modernized Python-based workflow, while retaining high-efficiency Fortran kernels for processing dynamics interfaces. Key features include GPU-accelerated training via TensorFlow, the robust Levenberg–Marquardt optimizer for high-precision fitting, real time monitoring via Jupyter and Tensorboard, and an active learning module that is built on top of these. We demonstrate the capabilities of CQPES through four representative case studies: CH4 to benchmark high-symmetry handling, CH3CN for a typical unimolecular isomerization reaction, OH + CH3OH to test GPU training acceleration on a large system, and Ar + H2O to validate the active learning module. Furthermore, CQPES provides direct interfaces with established dynamics software such as Gaussian 16, Polyrate 2017-C, VENUS96C, RPMDRate v2.0, and Caracal v1.1, enabling immediate application in chemical kinetics and dynamics simulations.

ChemistryVol. 7(6)
Chongqing University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 66%
Machine Learning in Materials Science
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